Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00985 ATGATGCACGGCAGAAACAATGGCAAGGAACTTATGGCTGTTAGGATCATCAAGCATGCTAGGGAAATTATTCATTTGTTGACTGACCAGAACCCAATTCAGGTTATTGTTGATGTCGTCATCAACAGTGTTCCACGTGAAGATGCAACTCGAATTGGTTCTGCTGGAGTTGCTAGGAGACCAGCTGTGGATATCTCACCCCTGCGTTGTGTTAATCAAGCCATCTAA 228 0.443 MMHGRNNGKELMAVRIIKHAREIIHLLTDQNPIQVIVDVVINSVPREDATRIGSAGVARRPAVDISPLRCVNQAI* 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00985 75 Pfam Ribosomal protein S7p/S5e 3 75 IPR023798 -
Rops5g00985 75 SUPERFAMILY Ribosomal protein S7 1 75 IPR036823 -
Rops5g00985 75 PANTHER RIBOSOMAL PROTEIN S7 1 75 IPR000235 GO:0006412
Rops5g00985 75 Gene3D Ribosomal protein S7 domain 1 75 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00985 Rops-Chr5 19320045 19320272 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00985 1 75 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 82.667 5.32e-40 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00985 K02989 - qsu:111994058 132.109