Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00979 ATGGTGACGGAAACAAAAAGCTTGTCAGATAGGTTTGCTGAATTAACAAGGACTTCTAGGGAGTCTAGTTATGGGTCAGAGTCAACAGCAGGGATGTTCCCATGGGTGTCACAAGAGTTGATGGAAGCATTGACCACTCTGCAACAAACATTTATTGTCTTAGATGCTACCAAACCAAATTGCCCAATCATGATGCAGCTAAAATTGGAAAAAAGTTATTGTGGCAGGCTTTTAAACTATAAGAAATATGGAACTCCATTTTGGAATCTTCTCACTATCACTTTCATTAAAGATGATTATGGCAATACTATCAAATTCATTGGAATGCAAGTTGAGGTGAGCCAGTATACAGAAGGCTTGAATGAAAAGGCATTAAGACCAAATGGAATGCCAAAGTCATTAATTCGTTATGATGCTCGTCAAAAGGAGAAAGCTTTGGGTTCAATGATTGAGGTTGTCCAAATTGTTAAGGACCCAGAATCCATTATTCTAGCTATGAATAATGACACTGCCTCTACCAAGCATGAAGAGTAA 534 0.382 MVTETKSLSDRFAELTRTSRESSYGSESTAGMFPWVSQELMEALTTLQQTFIVLDATKPNCPIMMQLKLEKSYCGRLLNYKKYGTPFWNLLTITFIKDDYGNTIKFIGMQVEVSQYTEGLNEKALRPNGMPKSLIRYDARQKEKALGSMIEVVQIVKDPESIILAMNNDTASTKHEE* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00979 177 PANTHER PROTEIN TWIN LOV 1 69 146 - -
Rops5g00979 177 Gene3D PAS domain 63 168 - -
Rops5g00979 177 SUPERFAMILY PYP-like sensor domain (PAS domain) 28 115 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00979 Rops-Chr5 19204022 19204673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00979 31 170 AGC Kinase Gene Family AT5G58140 56.111 2.80e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00979 K20715 - gmx:100820096 242.662