Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00966 ATGGATTTTGTTGAAGGAGTGGGAGAGAGTTCATCACCACCACGTTCCTTCAGCGGTTTTGGCAACTACGATGTGAGGAACGATGTGTATAATCGCTTGGTGGAAACCGGCCATGATCAAGCGGTGTCGAATCCGGATTTTAGAGAACAGTTAGAGGCTCACTTTAATCGCTTTCCTCCAAGTTATGGACTCGATGTTAATATGGATAGAGCTGAAGATGTTCTATTACATCAAAGTCTTCTTACTTTGGCAAGAGACCCTGAAAAGCGCCCTGTCTTCCATGTACGCTTCTTGGAGAATATTTCTACTCAAACAGATGGTGAAGATCAACAAATTGTAAGTACTCATTCTAGCCCAAGACCATCTTCTCTTGCAGCTAATGGGGGAGCTGTATCATCTCATAAGAGGACGAGGGATCATGCAACTGACTTTGAGCCTTGCTCAAAGCTTGAGGACCTAAATTTGGATGTTAGAAAGAACTCCAAGGAGATAGAGGAAAGATTTTTTGCTGACAACCTTTCCCAGAGGCAGGAATGTACAAATGTCCCAATTCATGAAGTAATATTTTCCACTATCGACAGGCCAAAGCTTTTAAGCCAGCTGTCAGCTTTGCTGTCTGATATTGGGCTTAACATCCGTGAAGCACATGTTTTTTCCACAACTGATGGTTACTCCCTTGATGTATTTGTGGTGGATGGATGGACAGTAGAGGAAACAGATGGTTTATATGAAGCTATGGAAAAAGCTGTTGCGAGAAGTGAGGGATCATGGTCTCGATCTTCAAATTCCCATTCAGCTGTGGAGAAACCCTTAGCAGCAGAAGCAACATGTGGAGACTGGGAAATAGACAGGAGGTTATTGAAGATAGGAGAAAGAATAGCCTCTGGATCCTATGGTGATTTGTATCATGGAGTTTATCTTGGTCAAGATGTTGCTGTCAAGGTTCTGAGATCTGAACAATTGAATGACGCTTCAGAGGATGAGTTTGCTCAAGAAGTGGCAATTCTGAGTCAGGTACATCATAAAAATGTTGTTCGTTTCATTGGTGCGTGTACAAAGTCTCCACATTTGTGCATAGTAACAGAGTATATGCCTGGAGGAAGTCTGTATGATTACTTGCACAAAAATCGTAATGTCTTGGAGCTGTCTCCATTACTAAAGTTTGCGATTGATGTTAGCAAGGGTATGGAGTATTTGCATAGAAACAACATAATTCACAGGGATCTGAAGACGGCCAATCTGCTGATGGATACACACAACGTTGTTAAAGTAGCAGATTTTGGAGTTGCTCGGTTCCTAAATCAAGGGGGAGTGATGACTGCAGAAACTGGAACATATAGATGGATGGCGCCAGAGTGCCTTACTGTTATCGGATTTTTTCACAAGGTTATAAACCATCAGCCGTATGATCAGAAAGCAGATGTGTTCAGCTTTTCTGTAGTACTGTGGGAATTAGTGACATCAAAGGTACCATATCATCCTATGACTCCACTACAAGCTGCCTTGGGTGTGAGACAGGGTCTGCGCCCAGAACTTCCAAAGCATGGGCACCCTAAACTGGTTGATTTGATGCAAAGATGTTGGGAAGCAGTTCCAAGCAACCGGCCATCCTTCCATGAGATAACAATCGAACTTGAGAATCTTTTACAAGAAGTTGAGAATGATTCACAAGCTAATGGTGCTTGA 1686 0.427 MDFVEGVGESSSPPRSFSGFGNYDVRNDVYNRLVETGHDQAVSNPDFREQLEAHFNRFPPSYGLDVNMDRAEDVLLHQSLLTLARDPEKRPVFHVRFLENISTQTDGEDQQIVSTHSSPRPSSLAANGGAVSSHKRTRDHATDFEPCSKLEDLNLDVRKNSKEIEERFFADNLSQRQECTNVPIHEVIFSTIDRPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWTVEETDGLYEAMEKAVARSEGSWSRSSNSHSAVEKPLAAEATCGDWEIDRRLLKIGERIASGSYGDLYHGVYLGQDVAVKVLRSEQLNDASEDEFAQEVAILSQVHHKNVVRFIGACTKSPHLCIVTEYMPGGSLYDYLHKNRNVLELSPLLKFAIDVSKGMEYLHRNNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPECLTVIGFFHKVINHQPYDQKADVFSFSVVLWELVTSKVPYHPMTPLQAALGVRQGLRPELPKHGHPKLVDLMQRCWEAVPSNRPSFHEITIELENLLQEVENDSQANGA* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00966 561 CDD STKc_MAP3K-like 293 545 - -
Rops5g00966 561 SUPERFAMILY Protein kinase-like (PK-like) 266 549 IPR011009 -
Rops5g00966 561 FunFam Serine/threonine-protein kinase isoform 1 278 365 - -
Rops5g00966 561 SUPERFAMILY ACT-like 185 252 IPR045865 -
Rops5g00966 561 Gene3D Phosphorylase Kinase; domain 1 275 364 - -
Rops5g00966 561 Coils Coil 147 167 - -
Rops5g00966 561 PRINTS Tyrosine kinase catalytic domain signature 473 495 IPR001245 GO:0004672|GO:0006468
Rops5g00966 561 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Rops5g00966 561 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Rops5g00966 561 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Rops5g00966 561 ProSiteProfiles ACT domain profile. 186 260 IPR002912 -
Rops5g00966 561 ProSiteProfiles Protein kinase domain profile. 287 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00966 561 SMART serkin_6 287 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00966 561 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 147 551 - -
Rops5g00966 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Rops5g00966 561 Pfam Protein tyrosine and serine/threonine kinase 287 543 IPR001245 GO:0004672|GO:0006468
Rops5g00966 561 Gene3D Transferase(Phosphotransferase) domain 1 365 560 - -
Rops5g00966 561 MobiDBLite consensus disorder prediction 105 130 - -
Rops5g00966 561 MobiDBLite consensus disorder prediction 105 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00966 Rops-Chr5 18757724 18788051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00966 24 557 MAP Kinase Kinase Kinase AT4G35780 49.084 6.83e-178 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops5g00966 PK_Tyr_Ser-Thr 1.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00966 - - gmx:100782737 929.087