Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00964 ATGGAATGCATCCCTGGAAGCCTAGGTTGGCCTATTGTGGGTGAGAGTTTCTCATTCCTCTCTGACTTTTCAAGTCCATCTGGAATCTTTAGCTTCATGAACAAGAGGCAGAAGAGATATGGAAAGGTTTTCAAGAGTTTTGTCCTGGGGAGGTTCACTGTCTTCATGACTGGGAGAGAAGCAAGTAAGATATTGTTAACTGGGAAGGATGGGATTGTGAGCTTGAATTTGTTTTATACTGGCCAGCAAGTTCTTGGCCCTACCAGCTTGCTGCAAACCACTGGAGAAGCACACAAAAGGCTAAGAAGACTGATTGCTGAACCCTTGTCAGTTGATGGTCTGAAAAAATATTTCCATTTTATCAATACTCAGGCAATGGAAACATTGGATAAATGGCATGGAAGGAAAGTCCTGGTTCTTGAAGAGGCTTCTACAGTTGAGTACCCCTTGTTTACTCTAAAAGTGATTGGACACATGATCATGAGCTTAGAGCCTACTGGAGAAGAACAAGAAAAGTTTAGGTCAAATTTCAAGATTATTTCTTCCTCATTTGCCTCATTGCCTTTTAAGCTTCCAGGGACAGCTTTTCATCGTGGTATCAAGGCTCGGGATAGGATGTATGAAATGTTGGATTCTACAATTTCCAGGAGGAGAAGTGGCCAAGAATTTCAACAGGATTTCTTAGAATCCCTAATTATGAAACACAGCAGAGAAGCAAATGGAGAAGATGATGAAAATAAACTCACTGATAAACAATTGAAGGACAATGTATTAACTCTGCTTGTTGCAGGCCATGATACCACAACTGCTGCTCTTACATGGCTTATCAAATTTCTTGAAGAAAATCCAACTGTTTTAGAGCAATTGAGAGATGAACACTCACAAATTATTGCAAACAGAAAGAGCGGAATGGATCTTACATGGTCTGAAGTTAATAACATGCCTTACACAGCCAAAGTGATCAGTGAAACACTTAGAAGAGCCACCATACTACCTTGGTTCTCAAGAAAGGCATCCCAAGATTTTGAAATTGATGGATATAAAATTAAGAAAGGTTGGTCCATCAACCTTGATGTTGTTTCAATACACCATGACCCGGAAGTTTTCCCAGATCCTGAAAAGTTTGATCCCTCAAGATATAATGAACCATTAAGGCCTTTCAGCTTTCTTGGATTTGGTAGTGGACCACGTATGTGTCCTGGAATGAACCTTGCCAAGCTTGAAATCTGTGTCTTCATCCATCACCTTGTCACCAGATACAAGTGGAGACCTCTGGAGAAAGATAATTCTGTCCAACCAACGCTTGTAAGGATGCCAAAGAACAAATTGGTGAAGACCTACAATATAAGGCTTGATAGAAATGTCAAGGCTATGCTTTGGGATTTTGGAAGAGAATATGCTTAA 1404 0.4031 MECIPGSLGWPIVGESFSFLSDFSSPSGIFSFMNKRQKRYGKVFKSFVLGRFTVFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQTTGEAHKRLRRLIAEPLSVDGLKKYFHFINTQAMETLDKWHGRKVLVLEEASTVEYPLFTLKVIGHMIMSLEPTGEEQEKFRSNFKIISSSFASLPFKLPGTAFHRGIKARDRMYEMLDSTISRRRSGQEFQQDFLESLIMKHSREANGEDDENKLTDKQLKDNVLTLLVAGHDTTTAALTWLIKFLEENPTVLEQLRDEHSQIIANRKSGMDLTWSEVNNMPYTAKVISETLRRATILPWFSRKASQDFEIDGYKIKKGWSINLDVVSIHHDPEVFPDPEKFDPSRYNEPLRPFSFLGFGSGPRMCPGMNLAKLEICVFIHHLVTRYKWRPLEKDNSVQPTLVRMPKNKLVKTYNIRLDRNVKAMLWDFGREYA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00964 467 CDD CYP90-like 36 451 - -
Rops5g00964 467 PRINTS P450 superfamily signature 390 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS P450 superfamily signature 263 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 Pfam Cytochrome P450 5 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 392 401 IPR017972 GO:0005506|GO:0016705
Rops5g00964 467 PANTHER CYTOCHROME P450 26 5 430 - -
Rops5g00964 467 FunFam Cytochrome P450 family 722 subfamily A polypeptide 1 1 448 - -
Rops5g00964 467 Gene3D Cytochrome P450 1 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 SUPERFAMILY Cytochrome P450 3 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS E-class P450 group I signature 399 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS E-class P450 group I signature 358 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS E-class P450 group I signature 389 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS E-class P450 group I signature 272 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS E-class P450 group I signature 318 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS E-class P450 group I signature 37 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00964 467 PRINTS E-class P450 group I signature 252 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00964 Rops-Chr5 18678343 18681453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00964 5 430 Cytochrome P450 AT5G45340 36.150 5.49e-96 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00964 - - gmx:100810666 817.379