Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00961 ATGGCTGCAGCAGTGATGGGTGGAGCTTTCCTTGATGTTGTTTTCGACAGGCTGGCTTCACCTGAAGTTGTCAACTTGATCCGAGGAAAGAAGCTCGACCCCAGGTTGCTTCAAAGGTTGGAGACAACTCTGATAGCGGCTGGAGCTGTGCTTGACGATGCTGAGAAGAAACAGTTCGGAGACTCTAAGGTTAACACCTGGCTCAATGATCTCAAAGATGCTGTATATGTGGCTGATGACTTATTGGATGAAGTTTCTACCAAAGCTGCCACTCAAAAGGAGGTGAGTAACTTGTTCTCTCGCCTTTTCAGTTTGCAAGATAGGAAGATGGTTAGTATGTTGGAAGACATAGTTGTAAAACTAGAAAATATCTTAAAACTCAAAAAGAGTCTTGATCTCAAAGATATTGCAATGGAGAACTTGTCACACAAACTTCCATCAACGTCTCTGCCAGATGGATCACTTACATATGGCAGGGATGAAGACAAGGAGGCCATAATCAAGATGTTGTTAGATGATAAAAGTGATGGTGAACAAGTATCTGTGATCCCTATTGTGGGTATGGGTGGGGTAGGAAAGACCACTTTGGCTCAATTGGTGTATAATGATGAGAATGTGAAGCAGATATTCGATGTTAAAGCATGGGTTTGTGTTTCAGAAGAGTTTGATACTGTGAGGGTTACAAAGACTATAATAGAGGCAGTTACTCGAAAAACTTGTAAAATGAATGATCTAAATTCATTTCAGGAAGAATTGCTGGACAAACTGAATGGAAAAAAATTCTTAATTGTTTTGGATGATGTGTGGATGGAAGATAATGATATTTGGAATCTTTTTAAAAAGCCTTTTCAAAGTGGGAATAGGGGAAGTAAAATTCTTGTAACAACACGTAGTGGAGAGGTTGCTTCTACAATCCACGCGGTTCAAACTCACTATCTAAAGGAGTTGTCAAATGAAGATTGTTGGTTAGTGTTAGCAAATAATGCATGTTTTTCCACAACATCTAGCCAGAATGCGAAAGATCTAGAGAAAATTGGTAGGGAGATTGTTAGAAAGTGTAAGGGATTGCCTTTAGCAGCACAATCACTCGGAAGTATATTGCAAAGAAAGCATGATATAAGGGACTGGAATAATATATTGAATAGTGACATTTGGGAACTTTCTAAAAAAGAAAAGAAGATTATTCCAGCATTGAGAATCAGTTATCACTATCTCCCTCCACATTTAAAGCGCTGCTTTGTTTATTGTTCATTATATCCCAAAGATTATGAATTTTATAAAAATGATTTAATCTTGTTATGGATGGCTGAAGATCTTTTACCAAAATCAAATGAAGGAAAGACTTTAGAAGTTGGTATTGAGTATTTTGATTATTTAGTTTCAAGATCATTCTTTCAGCGTACTCGACAACACAAGTCTTCACTGATTCAAGATCTCACGCCTGGATTAGCACGACACGAGTCTTTTGTGATGCATGATCTCATGCATGATTTAGCGACATTTCTTGGGGGAGAATTCTACTTTAATTCTGAAGAACTTGGAAAAAATACAAAGATTAGTAGCAAGACTTGCCATTTTTCATTTGGCAAGTTCAATTATCCAATCTTGGAAAACTTTGGTAGAGTAAAATTTCTGAGGACTCTCTTATTGACAAGGGAATTTTATTTAGATCCATTCAGCAAGGAAGAAGTTCCATGTATCATGCTATCGAAGCTTAGGTACTTAAGAGTTTTATCATTCTATGCCTTTGGTCTCGATGCATTGCCAGATTCAATAGGTGAATTGATCCATTTGCGGTATTTAGATCTCTCCCGCACAAGCATAAAGGCATTGCCAGAATCATTGTGTAATTTGTACAATCTACAAACGTTGAAGCTGCATGGTTGTTATAGGTTGACTATGCTACCCAATGACACGCAAAATCTTGAAATCTTGTGCCATCTTGATATTGATATAGGTTCTTTAAAGGAGATGCCAAAAGGAATGAGCAAATTAAATAAGTTGCATCATTTACCTTTCTTTATTGTGGGCAGGAACGAAGAGAATGGGATCAAGGAATTGGGAGGGCTTTCAAATCTTCATGGATCACTTGAAATTTTGAAATTAGAGAATGTTACCAATAGCAAAGAAGCATTGGAGGCAAGAATAATGGACAAAAAACACATTAGCAATTTATACTTGAAATGGACAATAGGTGACGATTGTACTGATTCTCATATTGAAATCGATATACTTTGCAAGTTACAGCCTCACCAAGACCTGCAGGTGATATGGATAAGTGGCTATAAGGGTACAAGATTTCCGGATTGGGTTGGAAATTCTTCCTACCATAATATGACGGATATAAGACTATCTTTTTGTGACAATTGTTGGATGCTTCCTTCACTTGGACAACTACCATCTCTCAAGAACATGAGTATTTTATATTTCAATGCGCTGCATACTATTGATGCGGGTTTTTACAAGAATGATGATTCTTCTCATGTGACACCCTTTCTCTCCCTTGAATCTCTATATTTTGCAAACATGGCTAATTGGGAGGTGTGGAGTTTGTTTGAGTCCGATGCCTTTCCTCAACTTAAACACCTGATGATAAGTCGTTGTCCCAAGCTAAGGGGAGATTTGCCAAATCATCTTCCTGCTCTGGAAACACTTAAGATTCAGTATTGCCAGCAGCTTACCTCTTCTCTCCCAAGGACATGGTTCAAACTGATGGATTATTCCAGCCTACCTCTGGTTACAGCTTCTTTTGGACCTGCCTCTCAGGAAACCGGGAAGTTCTGCTCTGTGGGCAGGCTGCCTTTGGGGAGTGAAGTGAATCCCAATACACTGTACTGTTTGCTGGAGTCTTGA 2853 0.3852 MAAAVMGGAFLDVVFDRLASPEVVNLIRGKKLDPRLLQRLETTLIAAGAVLDDAEKKQFGDSKVNTWLNDLKDAVYVADDLLDEVSTKAATQKEVSNLFSRLFSLQDRKMVSMLEDIVVKLENILKLKKSLDLKDIAMENLSHKLPSTSLPDGSLTYGRDEDKEAIIKMLLDDKSDGEQVSVIPIVGMGGVGKTTLAQLVYNDENVKQIFDVKAWVCVSEEFDTVRVTKTIIEAVTRKTCKMNDLNSFQEELLDKLNGKKFLIVLDDVWMEDNDIWNLFKKPFQSGNRGSKILVTTRSGEVASTIHAVQTHYLKELSNEDCWLVLANNACFSTTSSQNAKDLEKIGREIVRKCKGLPLAAQSLGSILQRKHDIRDWNNILNSDIWELSKKEKKIIPALRISYHYLPPHLKRCFVYCSLYPKDYEFYKNDLILLWMAEDLLPKSNEGKTLEVGIEYFDYLVSRSFFQRTRQHKSSLIQDLTPGLARHESFVMHDLMHDLATFLGGEFYFNSEELGKNTKISSKTCHFSFGKFNYPILENFGRVKFLRTLLLTREFYLDPFSKEEVPCIMLSKLRYLRVLSFYAFGLDALPDSIGELIHLRYLDLSRTSIKALPESLCNLYNLQTLKLHGCYRLTMLPNDTQNLEILCHLDIDIGSLKEMPKGMSKLNKLHHLPFFIVGRNEENGIKELGGLSNLHGSLEILKLENVTNSKEALEARIMDKKHISNLYLKWTIGDDCTDSHIEIDILCKLQPHQDLQVIWISGYKGTRFPDWVGNSSYHNMTDIRLSFCDNCWMLPSLGQLPSLKNMSILYFNALHTIDAGFYKNDDSSHVTPFLSLESLYFANMANWEVWSLFESDAFPQLKHLMISRCPKLRGDLPNHLPALETLKIQYCQQLTSSLPRTWFKLMDYSSLPLVTASFGPASQETGKFCSVGRLPLGSEVNPNTLYCLLES* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00961 950 Pfam Rx N-terminal domain 9 94 IPR041118 -
Rops5g00961 950 PANTHER DISEASE RESISTANCE PROTEIN RP 38 891 IPR044974 GO:0006952
Rops5g00961 950 Coils Coil 37 57 - -
Rops5g00961 950 FunFam Probable disease resistance protein At1g61300 143 310 - -
Rops5g00961 950 Pfam NB-ARC domain 160 402 IPR002182 GO:0043531
Rops5g00961 950 Gene3D - 135 311 IPR027417 -
Rops5g00961 950 Gene3D Ribonuclease Inhibitor 521 934 IPR032675 -
Rops5g00961 950 Gene3D - 401 500 IPR036388 -
Rops5g00961 950 SUPERFAMILY L domain-like 490 910 - -
Rops5g00961 950 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 416 IPR027417 -
Rops5g00961 950 Gene3D - 316 400 IPR042197 -
Rops5g00961 950 PRINTS Disease resistance protein signature 877 893 - -
Rops5g00961 950 PRINTS Disease resistance protein signature 353 367 - -
Rops5g00961 950 PRINTS Disease resistance protein signature 255 269 - -
Rops5g00961 950 PRINTS Disease resistance protein signature 182 197 - -
Rops5g00961 950 FunFam Probable disease resistance protein At1g63360 402 501 - -
Rops5g00961 950 Gene3D - 15 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00961 Rops-Chr5 18604646 18611907 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00961 585 679 WRKY Transcription Factor Family AT4G12020 35.417 6.14e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00961 - - gmx:100813244 1165.6