Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00946 ATGGACACCAAAAAGCTAATTATACCTTTCATTCTTGTTCTTTTCACTCCTTTTTCATTATCTTTTTTCACTCCCACAGACAACTACCTTCTCAGTTGTGGATCACAGACCAATGCTTCACTCTTCAACAGGCTCTTCATTGGTGATTCCACCAACCAAGGCTCAGCTTTTCTCTCTGCAGACAAATCCATTTCCCTCACCAGCCAAAACCCACCTCCAAATTTGCCAACTTTGTATCACACTGCTAGAGTTTTCACCAGTAAAGGGAGCTACAGATTCAACATGAGGCAAAATGGTACACACTTTGTTCGTTTTCATTTCTCACCTTTCAAGGCTCAAGGTTTTGATCTAAAATCTGCAAACTTTAGTGTCTTGGTTGATGGGAATTTGGTTCTGAGCAGTTTCAAGCCAAATAATGGTACGCTGGTTAAAGAGTTTATTTTGAGGGTTGAGTCAAATTTGCTTGAGATTGTGTTTAGACCTGAGGGCAATTCTGGTTTTGGCTTTGTCAATGCCATGGAGGTGTTTACTGCTCCTGCTGATTTTGTTTTAGATTATGGAGCTAGGTTGGTTGGTCCTTCTGGTGTGGAGGAGTACAAGAACGTTTCATACCAGGTTTTAGAAACTATCCATAGGATTAATGTTGGAGGTGTGAAATTAACTCCTTTTAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGGTTTTCTGGTTTTTAAGGATGCAGCTAAGCATGCAGTGAGCACTCACACACCAAATTACGAGAAGGATGGTGCAAGTAGAGAGATAGCACCTGATAATGTTTATATGACCGCCCAGGAGATGAATAGGGATCACTCCATTTTAGCTTCACAATTCAACATAACCTGGAATTTTCCAGTGACTTCTGGTGGTGTTCGACACTTGGTTCGGTTGCATTTCTGTGATATTGTTAGTCCTGCCCTTAATTTGCTCTATTTTGATGTGTATATCAATGGGAATTCTGCGTATAAGGATCTTGATTTGTCATCCCGTACATTCCATATGCTTGCATCTCCAGTCTATGTGGATTTCGTTGCGGATTCTGATGATTCAGGCCTTATTCAAATCAGTGTTGGGCCTTCTGATCTGAGCAGTTCTGTAAGGATGAATGCCATACTAAATGGTGCAGAGATAATGAAGCTGGTGAATGTTATGGATTCACATGTTGTTCCTAGGAAGAAAAGGTTGTGGTTGTTGGTGGGTTCAATTGTTGGAGGAGTTGTTGTTTTGCTTTTAGTTATAGCTGCCTTTCTAGTTGCTCTCAAATGCAGGAAGAAGAAACCAAAACAAGGGATGGTTGAAAGTGTAGGATGGACACCTTTACGTTTGTTTGGAGGGAGTTCACTTAATAGAATGTCTGAAGGGACAGCTTTTCCATCTCCTGGATCTTATGGATATTTTGGCTTGAGAATCCCTTTTGCAGATATAAAATCAGCAACAAACAATTTTGATAGAAGTCTAATTATAGGTTCTGGTGGGTTTGGTATGGTTTACAAAGGGGTGCTGAGAGACAACATGAAGGTTGCAGTCAAGAGAGGCATGCCTGGATCAAGACAAGGCCTTCCAGAATTCGAGACTGAAATAACAATTTTATCAAAAATTCGGCATCACCATCTTGTTTCTCTAGTTGGATATTGTGAAGAAAATTCAGAAATGATACTTGTCTATGAGTATGTGGAAAAAGGTCCACTTAAAAAGCATCTATATGGTTCAGCAGGACTTCAACCTTTGTCTTGGAAGCAGCGTCTTGAGATTTGCATTGGTGCTGCTAGAGGACTCCACTATCTTCACACTGGTTTTGCACAAGGAATCATCCACCGTGACATTAAATCAACCAATATTTTGCTTGATGAAAATTATGTAGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCAGGGCCTTGTATGAATGAAACCCATGTGAGCACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCCGAGTATTTCCGAAGGCAGCAACTTACAGATAAATCTGATGTTTATTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCAAGACCCGCTGTTGATCCACAACTTGATAGGGAACAGGTGAATTTAGCAGAATGGGCACTTGAATGGCAGAAGAAGGACATGCTGGAGCATATTATTGATCCTTATCTTGTTGGGAAGATCAAACAAAGCTCATTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATATGGTGTTGACAGGCCAACTATGGGTGATGTATTGTGGAATTTGGAATATTCACTTCAGCTCCAAGAAAGTGAACATGAAAGGGAGCCATATGCTGATAGCATTGCTCATGGATCAGTGAATGTGACAACCACGATAATTCCTGGGAATCCTTCTAGCAACATAAGAACAGAGGGAGATTATGACAATAATTATTCAGACATAGGTGCAACCCAAGTTTTTTCCCAACTAATGACCAATGAAGGCAGATAG 2493 0.4055 MDTKKLIIPFILVLFTPFSLSFFTPTDNYLLSCGSQTNASLFNRLFIGDSTNQGSAFLSADKSISLTSQNPPPNLPTLYHTARVFTSKGSYRFNMRQNGTHFVRFHFSPFKAQGFDLKSANFSVLVDGNLVLSSFKPNNGTLVKEFILRVESNLLEIVFRPEGNSGFGFVNAMEVFTAPADFVLDYGARLVGPSGVEEYKNVSYQVLETIHRINVGGVKLTPFNDTLWRTWIPDEGFLVFKDAAKHAVSTHTPNYEKDGASREIAPDNVYMTAQEMNRDHSILASQFNITWNFPVTSGGVRHLVRLHFCDIVSPALNLLYFDVYINGNSAYKDLDLSSRTFHMLASPVYVDFVADSDDSGLIQISVGPSDLSSSVRMNAILNGAEIMKLVNVMDSHVVPRKKRLWLLVGSIVGGVVVLLLVIAAFLVALKCRKKKPKQGMVESVGWTPLRLFGGSSLNRMSEGTAFPSPGSYGYFGLRIPFADIKSATNNFDRSLIIGSGGFGMVYKGVLRDNMKVAVKRGMPGSRQGLPEFETEITILSKIRHHHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYGSAGLQPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCMNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWALEWQKKDMLEHIIDPYLVGKIKQSSLKKFGETAEKCLAEYGVDRPTMGDVLWNLEYSLQLQESEHEREPYADSIAHGSVNVTTTIIPGNPSSNIRTEGDYDNNYSDIGATQVFSQLMTNEGR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00946 830 PANTHER OS07G0166700 PROTEIN 478 769 IPR045272 GO:0004714|GO:0006468
Rops5g00946 830 FunFam Putative receptor-like protein kinase 28 179 - -
Rops5g00946 830 ProSitePatterns Protein kinases ATP-binding region signature. 497 519 IPR017441 GO:0005524
Rops5g00946 830 FunFam Receptor-like protein kinase FERONIA 206 391 - -
Rops5g00946 830 SUPERFAMILY Protein kinase-like (PK-like) 474 760 IPR011009 -
Rops5g00946 830 Pfam Malectin-like domain 31 388 IPR024788 -
Rops5g00946 830 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00946 830 Gene3D Phosphorylase Kinase; domain 1 471 566 - -
Rops5g00946 830 SMART serkin_6 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00946 830 Pfam Protein tyrosine and serine/threonine kinase 496 759 IPR001245 GO:0004672|GO:0006468
Rops5g00946 830 CDD STKc_IRAK 497 763 - -
Rops5g00946 830 FunFam Receptor-like protein kinase FERONIA 567 778 - -
Rops5g00946 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Rops5g00946 830 FunFam receptor-like protein kinase FERONIA 459 566 - -
Rops5g00946 830 Gene3D - 206 390 - -
Rops5g00946 830 Gene3D - 28 180 - -
Rops5g00946 830 Gene3D Transferase(Phosphotransferase) domain 1 567 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00946 Rops-Chr5 18280712 18283639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00946 23 830 Receptor kinase-like Gene Family AT3G46290 49.517 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops5g00946 Malectin_like 1.7e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00946 - - gmx:100814974 1402.11