Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00936 ATGGTTGGCAATAAAGCATGGGCTTCACGACAAGGAGGCATGGGCGGCAGCAACCTGATGGGCAGCATGGGCGAAAATATCATAGGTGGGGTACCTCTTGCAGTTAAAAGGGAGAGTCTGGAACAAAGGAAAAAACTCAGTTTGGGGGAGAGAGAAAGTGAAGACACAGAAAGGTTGATCGATCTCAACACTATAGAGGATGATGAAGGTGTTTCTTCTTCATCATCTTCCTCTCACTCGGGCATAAGCACTTCTGCTTCAGCCATCGTTCCTCCTCCTCCACCACCTTCAGTGTGCTTGGAACTATGGCACATTTGTGTAGGACCCTTGATCTCTCTGCCTAAGAAAGGAATCGTTGTTTTGTACTTTCCACAGGGACACTTTGAACAAGTTCAAGATTTTCTGGTCACTGCCTATATTATCCCAACTCATGTGTTCTGTCGTGTTCTCGATGTCAAGCTACACGTTCGAGTCTAA 477 0.4633 MVGNKAWASRQGGMGGSNLMGSMGENIIGGVPLAVKRESLEQRKKLSLGERESEDTERLIDLNTIEDDEGVSSSSSSSHSGISTSASAIVPPPPPPSVCLELWHICVGPLISLPKKGIVVLYFPQGHFEQVQDFLVTAYIIPTHVFCRVLDVKLHVRV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00936 158 MobiDBLite consensus disorder prediction 43 89 - -
Rops5g00936 158 MobiDBLite consensus disorder prediction 67 87 - -
Rops5g00936 158 MobiDBLite consensus disorder prediction 43 65 - -
Rops5g00936 158 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 97 156 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00936 Rops-Chr5 18120987 18121678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00936 66 156 B3 DNA Binding Superfamily AT5G62000 34.694 1.66e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00936 K14486 - gmx:100789906 135.191