Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00919 ATGCCTTCATGGTGGGGAAAATCATCATCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTTTTATTGACACATTACAGCGAAAATTTAAAATCCCATCTGGAGGATCTGGTAGACGTTGCAATGACACAATTTCAGAGATGGGGGCTCAGTCTCCTTCTGGATCAAGATCTCCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTTGTGCTCAGCCACTACCTCTTCCTTGCCTGCACCCATCACATATAACCCGAGCAGATTCTGAAATTAGCATATCATCTAAATCAAGACTTGAAAAGGGCTCCAAGCCATCATTGTTTCTGCCACTACCAAAACCTGCATGCATGCGTGGTAGGCTGAACCCTGCAGATTTGGATGGAGATCTGGTCACTGCCTCAGTCTCTAGTGAGAGCTCTGCTGATAGTGATGAACCAGTTGACTCTAGCAATCGTAGTCCTCTGGCAACTGACTCTGAGACTGGGACTAGAACTGCTGCAGGCAGTCCTTCCAGCTTAATGCTCAAGGATCAATCATCTACTATTTCCCAAGTAAATTCAAGGGAAGCCAAAAAGCCACCAAACATTCTGGGCAATCACATATCTTCTACTTCACCAAAACAGAGGCCTTTGGGCAACCATGTTTCAAATCTGCAGATTCCTCCTCATGGTGCCTTTTGTAGTGCTCCTGACAGTTCCAGGTCAAGTCCGTCAAGAAGTCCATTAAGAGCATTTGGCACAGAACAAGTGTTGAACTCTGCTTATTGGGCTGGAAAGCCATATTCAGAGATCAATTTAGTTGGATCTGGGCACTGCTCAAGTCCAGGTTCTGGTCACAATTCTGGGCAAAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGTAGCCCTGAATATTCTCCTGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCTGTTACACCTATTGATCCCAGAGCTGGGGGAACACCCACTGAATCCCAAACAGGATGGGTTGATGATGGAAAACAACAGAGTCATCGTTTGCCCCTTCCTCCTTTAGCAGTTCCCCATTCCTCGCCTTTCTCTCATTCAAATTCTGCAGCAACATCTCCATCCATGCCAAGAAGTCCAGGAAGAGCAGATAATCCAATGAGCCCTGGTTCATGTTGGAAAAAAGGAAAGCTGATTGGCAGAGGCACGTTTGGACATGTCTATGTTGGCTTCAATAAGGAAAGTGGTGAAATGTGTGCAATGAAAGAGGTAACTCTGTTTTCAGATGATGCCAAGTCAAAGGAAAGTGCTAAGCAATTAATGCAGGAAATTTCCTTATTAAACCGTTTACGGCATCCAAATATCGTGCAGTATTATGGCTCTGAATCAGTAGGTGACAAGCTTTATATATACCTGGAGTATGTTGCTGGAGGCTCCATATATAAACTTCTTCAAGAATATGGGCAACTTGGTGAACTAGCTATTCGTAGTTATACTCAACAAATTTTGTCAGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATTAAAGGAGCAAATATACTGGTAGATACTAATGGACGGGTCAAGTTGGCAGACTTTGGCATGGCTAAGCATATAACTGGGCAATCATGTCCATTATCATTCAAGGGAAGCCCTTATTGGATGGCTCCAGAGGTCATAAAGAACTCTAGTGGGTGCAACCTTGCTGTTGATATATGGAGTCTTGGATGCACTGTTTTGGAAATGGCTACAACTAAGCCTCCGTGGAGTCAGTATGAAGGGATTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACTATCCCAGATCATCTCTCAAGTGAAGGGAAGGATTTTGTTCGGAAATGTCTACAACGTAATCCACACCTTCGCCCTTCAGCCAGTGAATTATTGGACCACCCTTTTGTAAAATATGCTGCACCTGTAGAAAGACCTATTTTGGGTCCTGAATCTTCAGACCCTGTATCTATGATTGCTCAAGGAGCAAAAGCTCTGGGCACAGGACAAGGAAGGAATCTTTCTACATTGGATTCAGATAGACTTGCTCTTCATTCTTCTAGGTTTTTGAAAACTAATCCTCATCCAAGTGAGATCTATATTCCAAGGAATATATCTTGCCCTGTCTCTCCCATCGGAAGCCCTCTTTTGAGACCAAGATCACCACAGCATATAAATGGAAGGATGTCTCCCTCACCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACGCCTCTCAATGGTGGTAATGGTGCCATTCCATTTAGTAATCACTTAGTTTACTTTCAAGAGGGTCTTGGAAGCTTGCCAAAATCCTCAAACGGTGTCTACATTAGTGGTCCTCCTCATCATGACTCAAATGTTGACATTTTTCGAGGAATGCAAAAGGGGTCTCACATTTCACCAGAACTGGTTCCAACTGAAAATGATGTTCTGGGGAAGCAGTTTGCAAGGCCTCCTCAAGATGAGCCATATGATGTTCAATCAGTCTTGGCTGATCGTGTTTGCCGGCAGCTGCTGGGGGATCATGGGAAGATGAATCCATCCCTTGATCTAAGTCCTAAATCCTCTTTGCTCAGCCGGGCAAATGGTTTATGA 2667 0.4436 MPSWWGKSSSKETKKKASKESFIDTLQRKFKIPSGGSGRRCNDTISEMGAQSPSGSRSPSPSKVARCQSFAERPCAQPLPLPCLHPSHITRADSEISISSKSRLEKGSKPSLFLPLPKPACMRGRLNPADLDGDLVTASVSSESSADSDEPVDSSNRSPLATDSETGTRTAAGSPSSLMLKDQSSTISQVNSREAKKPPNILGNHISSTSPKQRPLGNHVSNLQIPPHGAFCSAPDSSRSSPSRSPLRAFGTEQVLNSAYWAGKPYSEINLVGSGHCSSPGSGHNSGQNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIDPRAGGTPTESQTGWVDDGKQQSHRLPLPPLAVPHSSPFSHSNSAATSPSMPRSPGRADNPMSPGSCWKKGKLIGRGTFGHVYVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEISLLNRLRHPNIVQYYGSESVGDKLYIYLEYVAGGSIYKLLQEYGQLGELAIRSYTQQILSGLAYLHAKNTVHRDIKGANILVDTNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGIAAMFKIGNSKELPTIPDHLSSEGKDFVRKCLQRNPHLRPSASELLDHPFVKYAAPVERPILGPESSDPVSMIAQGAKALGTGQGRNLSTLDSDRLALHSSRFLKTNPHPSEIYIPRNISCPVSPIGSPLLRPRSPQHINGRMSPSPISSPRTASGASTPLNGGNGAIPFSNHLVYFQEGLGSLPKSSNGVYISGPPHHDSNVDIFRGMQKGSHISPELVPTENDVLGKQFARPPQDEPYDVQSVLADRVCRQLLGDHGKMNPSLDLSPKSSLLSRANGL* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00919 888 MobiDBLite consensus disorder prediction 1 20 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 137 195 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 371 389 - -
Rops5g00919 888 ProSiteProfiles Protein kinase domain profile. 403 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00919 888 MobiDBLite consensus disorder prediction 736 772 - -
Rops5g00919 888 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 51 674 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 26 119 - -
Rops5g00919 888 ProSitePatterns Protein kinases ATP-binding region signature. 409 432 IPR017441 GO:0005524
Rops5g00919 888 MobiDBLite consensus disorder prediction 277 402 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 92 106 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 202 220 - -
Rops5g00919 888 Pfam Protein kinase domain 404 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00919 888 CDD STKc_MEKK1_plant 403 659 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 39 65 - -
Rops5g00919 888 Gene3D Transferase(Phosphotransferase) domain 1 402 674 - -
Rops5g00919 888 SMART serkin_6 403 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00919 888 MobiDBLite consensus disorder prediction 873 888 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 747 772 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 277 305 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 137 247 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 340 354 - -
Rops5g00919 888 MobiDBLite consensus disorder prediction 866 888 - -
Rops5g00919 888 SUPERFAMILY Protein kinase-like (PK-like) 402 741 IPR011009 -
Rops5g00919 888 FunFam Mitogen-activated protein kinase kinase kinase 401 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00919 Rops-Chr5 17785603 17794020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00919 4 877 MAP Kinase Kinase Kinase AT1G63700 59.707 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops5g00919 Pkinase 8.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00919 K20717 - gmx:100792783 1504.58