Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00907 ATGGCTTCTAGTCAATTCGATCGCACAGGTTCGGGTCGGAAGGTTCGGGTCTTGGCCAAACTCCGAGGCTATTCGGGTCCCGATGGAAATTCGAGAACGGTGGAGTGGGTTTCGGTGAACCGGGAAAATTCGGAGGAAGTCACCATCTCCTTCGGTGAACAATCTTCTAGTCGTTATTCGGTTGACTATTGCTATAAGGAACATGAAGATAATGAGGTGATATATTCAAAGGAGGTGAAGCCTCTTGTTTCAGCAGCTTTTGATGGTCATAACAGCACTGTTATTGCTCATGGAGCTAGAGGCAGTGGAAAGACCCACGTAATTCAGGGCTCTGCTGAGAAACCTGGGTTGGCAGTGCTTGCTACAGCTGAGTTTCTTTCGATGGCTGAGAAAAAAGGGAAATCTATAGCTGTTTCTTTCTATGAGGTTGATCATCAGGAGCATTCTGTTGATTTATTAAATCCAGAGCGACCACCAATTCTGGTCTTTGAAGATCGTGGAAGAATTCAGTTTAAAGGACTTACTCAGATTCCTGTGAAATCCATTGCTGAGTTTCAGAATCTGTACTTCACTGCATGTTCTGCACAGAAGGCAGCTCCCAAAAAAGGATATGAGCTTGCTCGTAGAAGTCACATGGGATTAATTGTGCATGTCTTTTCCCAGAATGAAAACGTAGAAGGCCTTGTGAGCAAAATGAATTTTGTTGATATGGCAGGTTATGAAGATGCTAGAAAGAAAAGTAGTGATGGTTCTGGCCTTGCTGAGACTAACAAAATTAACAAGTCAATTTATGCCTTGCTGAATGTTTGTCATGCTTTGAACACAAATGAAAGTCGTGTTCCCTACCGGGAAAGCAAACTTACACGCATGTTGCAGGATTCCTTGAGGGGGACTAGCAAAATTTTGTTGGTTTCCTGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTAAGCTTAGCATCACGGTCATGTCAATGGATTCATCGGACACCCTTAGATTCCACAAAGAGAAATGGAAGTTCAGCAAGACAGATGGTGACTTCTCATAAGAACCAGATACCCAAAAATGTTTTGGCAACAACAAAGAAAATACTAGGTTCCAAGTCAAATATATCTGAAAAGAAAGCTGCTGTTGCGAAGTCTGCAACGAAAGGAAGGAAATTGTTTGATGAAGCCAGCCACTCTGCTCCTAAAGCTGAGAAGGCAAGGTTTTTGTCAGATATGTGTTCAACCTTTGAAACTTTAATGCAGGAAAAGGAAATTTCCATTGCCCATGTTACCAAAGCATCAGAGCCTTTATTGGACAATTCATTATCAGAAGCTGAAAATCATGTCGAACTCAACTCTAGAGTGGAAAAGGATAATTTATTTCCAGATGCTAGTAACGATGTGAAAGTCAATCTGATGGTGGAAAATGATGACTCATCTTTGAATGCTGGCAATGAAGTGGAACTCGATCCCCTAGTGGAAAAGGTTATTTATGTGGATAAAGGGGATCAAGAGAAACATATTTCTGTGGATAAAGAGGATCATCAAGAGAAACATATTTCTGTGGATAAAGAGGATCATCAAGAGAAACATATTTCTGTGGATAAAGAGGATCATCAAGAGAAACATACCCCTTATGCCAGTAATTACTCCAAAGCATTGTCAATAGTTCAAGAAGGCCATAACATGAACAAGGAGAACGCCAGCTTAGTGGCAAATGAAGTTGGTTCACCCCCCATCAGTTCTCAACTGCGGGATCTCTCTAACAGTCTTAAATTGCTCTTTTCGTCAACTCCATTAAGCATGCAGATACCAGAAAAGGAATGCATTTCACAAAATGATCAGATGTCTGATGATATTGTGGAACCAAGAACTCCTGTGATTGAACAAAATAAGTGCTTTAATGAAAGATGGGATGCAATGAATGCCAAAAGTCCTTGGCAAACATTCAGCATGCGCAGTTCTGGAATGAAGAATTCTCTTGTTCAAGAATACCTTAGGTTTTTAAACACAGCTGACAAGGAAGAATTAAAAAAATTAAAGGGAATTGGAGAGAAGAGAGCAACCTACATACTTGAGCTTCGTGAAGAATCTCCAGAGCCTTTCAAAAATCTTGATGATTTAAAGGATATTGGACTTTCAGCAAAGCAGATCAAGGGAATGATGAAGAAGGAAGTTGGAGAGCTATTCGATTAG 2190 0.4068 MASSQFDRTGSGRKVRVLAKLRGYSGPDGNSRTVEWVSVNRENSEEVTISFGEQSSSRYSVDYCYKEHEDNEVIYSKEVKPLVSAAFDGHNSTVIAHGARGSGKTHVIQGSAEKPGLAVLATAEFLSMAEKKGKSIAVSFYEVDHQEHSVDLLNPERPPILVFEDRGRIQFKGLTQIPVKSIAEFQNLYFTACSAQKAAPKKGYELARRSHMGLIVHVFSQNENVEGLVSKMNFVDMAGYEDARKKSSDGSGLAETNKINKSIYALLNVCHALNTNESRVPYRESKLTRMLQDSLRGTSKILLVSCLNPSFCQDTIYMVSLASRSCQWIHRTPLDSTKRNGSSARQMVTSHKNQIPKNVLATTKKILGSKSNISEKKAAVAKSATKGRKLFDEASHSAPKAEKARFLSDMCSTFETLMQEKEISIAHVTKASEPLLDNSLSEAENHVELNSRVEKDNLFPDASNDVKVNLMVENDDSSLNAGNEVELDPLVEKVIYVDKGDQEKHISVDKEDHQEKHISVDKEDHQEKHISVDKEDHQEKHTPYASNYSKALSIVQEGHNMNKENASLVANEVGSPPISSQLRDLSNSLKLLFSSTPLSMQIPEKECISQNDQMSDDIVEPRTPVIEQNKCFNERWDAMNAKSPWQTFSMRSSGMKNSLVQEYLRFLNTADKEELKKLKGIGEKRATYILELREESPEPFKNLDDLKDIGLSAKQIKGMMKKEVGELFD* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00907 729 Gene3D Kinesin motor domain 3 327 IPR036961 -
Rops5g00907 729 FunFam Kinesin-like protein KIN-10C 653 727 - -
Rops5g00907 729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 335 IPR027417 -
Rops5g00907 729 MobiDBLite consensus disorder prediction 509 542 - -
Rops5g00907 729 Pfam Helix-hairpin-helix motif 667 714 - -
Rops5g00907 729 PRINTS Kinesin heavy chain signature 280 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00907 729 PRINTS Kinesin heavy chain signature 231 249 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00907 729 PRINTS Kinesin heavy chain signature 89 110 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00907 729 FunFam Kinesin-like protein KIN-10C 3 329 - -
Rops5g00907 729 PANTHER KINESIN-RELATED 48 583 IPR027640 GO:0003777|GO:0007018
Rops5g00907 729 SUPERFAMILY RuvA domain 2-like 658 722 IPR010994 -
Rops5g00907 729 ProSiteProfiles Kinesin motor domain profile. 14 328 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00907 729 Pfam Kinesin motor domain 34 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops5g00907 729 Gene3D - 654 727 - -
Rops5g00907 729 SMART kinesin_4 12 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00907 Rops-Chr5 17577591 17582825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00907 59 310 Calmodulin-binding Proteins AT5G65930 30.769 2.34e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00907 K10403 - gmx:100809612 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00907 5 17577591 17582825 Rops5g00907 5 17577591 17582825 ECH