Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00904 ATGGTGTATCAATCTCGGCGATACCTTCAAAACCCTATTTTTTGTTCTCCCACACGTAGCACCACAACAGGGAAAATGGCTCCTAAGCAGCCAAATACGGGTCTCTTTGTTGGATTGAACAAGGGTCATGTTGTCACCAAGAAGGAATTGCCTCCACGCCCCTCTGATCGCAAGGGGAAAACTAGCAAGCGGGTACACTTTGTAAGGAACCTGATCCGTGAGGTTGCTGGTTTTGCTCCTTATGAAAAGCGTATCACTGAGTTACTGAAGGTTGGGAAAGATAAGAGGGCACTGAAGGTTGCCAAGAGAAAGCTTGGAACCCATAAACGTGCAAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCAGAAAGATGAGGGCCGGTGGAGCTGGTGAGAAAAAGAAGTGA 408 0.473 MVYQSRRYLQNPIFCSPTRSTTTGKMAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGEKKK* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00904 135 ProSitePatterns Ribosomal protein L36e signature. 80 90 IPR000509 GO:0003735|GO:0005840|GO:0006412
Rops5g00904 135 MobiDBLite consensus disorder prediction 112 135 - -
Rops5g00904 135 PANTHER 60S RIBOSOMAL PROTEIN L36 20 134 IPR000509 GO:0003735|GO:0005840|GO:0006412
Rops5g00904 135 Gene3D 60S ribosomal protein L36 23 133 IPR038097 -
Rops5g00904 135 FunFam 60S ribosomal protein L36 26 131 - -
Rops5g00904 135 MobiDBLite consensus disorder prediction 104 135 - -
Rops5g00904 135 Pfam Ribosomal protein L36e 33 126 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00904 Rops-Chr5 17540048 17546093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00904 33 135 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 86.667 1.53e-58 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00904 K02920 - vvi:100262717 215.698