Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00903 ATGGGTTCTCACACTCTTTGCTTTTCTCTTTCCTCGTCTGCCAGTGATAGCACATTATTTAGCTTAGCCCAGACAAGAAAGAAAGGCCTATTTTTGGGTCTAAGCCCAAAAATCCATAGGGCCTGGCCCACTGAAACTCTCAAAACCCTAGTTCTTCCGCAACCAACCACAGGTAAAATGGCTCCGAAGCAACCAAGTACGGGTCTTTTTGTCGGGTTGAACAAGGGTCACGTTGTTACCAAGAAGGAGTTGCCACCACGCCCTTCTGATCGCAAAGGGAAAACAAGCAAGCGTGTGCACTTTGTAAGGAACCTCATCCGTGAAGTTGCTGGTTTTGCACCTTATGAAAAGCGTATAACTGAGTTGCTGAAGGTTGGAAAAGATAAGAGGGCGTTGAAAGTTGCCAAGAGAAAGCTCGGAACTCACAAACGTGCCAAGAAGAAGCGTGAGGAGATGTCCAACGTTCTCCGAAAGATGAGGTCTGGTGGAGCCGGTGAGAAGAAGAAGTAA 510 0.4725 MGSHTLCFSLSSSASDSTLFSLAQTRKKGLFLGLSPKIHRAWPTETLKTLVLPQPTTGKMAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSGGAGEKKK* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00903 169 ProSitePatterns Ribosomal protein L36e signature. 114 124 IPR000509 GO:0003735|GO:0005840|GO:0006412
Rops5g00903 169 FunFam 60S ribosomal protein L36 60 165 - -
Rops5g00903 169 Gene3D 60S ribosomal protein L36 57 167 IPR038097 -
Rops5g00903 169 MobiDBLite consensus disorder prediction 136 169 - -
Rops5g00903 169 Pfam Ribosomal protein L36e 67 160 IPR000509 GO:0003735|GO:0005840|GO:0006412
Rops5g00903 169 MobiDBLite consensus disorder prediction 146 169 - -
Rops5g00903 169 PANTHER 60S RIBOSOMAL PROTEIN L36 57 168 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00903 Rops-Chr5 17535780 17537909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00903 66 169 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 86.792 3.37e-59 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00903 K02920 - cave:132189827 216.853