Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00892 ATGGAGTTCATTGGGCTATCAGAGGCTCTTGTTGCACTCTCCTCAATAATAGTTGCTATTTGTCTATGCTTGCTCACTACACTAACATTTTTTTGGTGGATCTTACCAAACCAAAAACTTCAAAACCTTAAAAAACGTGGGTTTGGAGGGCCAACCCCAAGTTTCCCTTTTGGAAACATCAAAGATATGAAAAGTAAGAAGAGCCTTATTAGCTCTTCTTTTTCTTCTTCATTTGAGTCCTCAATTCTCACCCATGACATACACTCTATTGTTTCTCCTTATTATTCTTCTTGGCAGAAATCTTATGGGAAAGTTTTCGTATATTGGTTGGGAACGGAGCCATTTTTATACATTGCAGACCCTGAATTCTTGAAGAAAATGTCCACAAAGGTTTTGGCCAAGAAATGGGGAAAACCTAGTGTGTTTAGAAATGACAGAGACCCCATGTTTGGGAATGGTTTGGTTATGGCTGAAGGCAACAAATGGGTTCATCATCGACATGTTATAGCCCCGGCACTTTCTCCCCTTAACTTGAAGGCAATGGCTAGCAAGATGGTTGAGTCCACGAGGAAAATGATAGATAGGTGGGTTTCCCAAATAAACTCTGGCAACCTTGAAATTAATGTGGAGAAAGAGATAATAGCAACAGCTGGAGAGATAATAGCAAGAGCAAGTTTTGGAATGGGAGATGAAAATGGAAAGCTAGTGTTTGAAAAACTAAGAACTCTACAAATGACCCTGTTTATGACCAATAGATATGTGGGGGTTCCATTTGGGAAGTTCTTCAATGTCAAAAAAACTCTAGAGGCCAAAAATCTTGGTGAAGAAATTGACAAGCTTTTGTTGTCCATCATAGAAGGTAGGCTAAATTCAGATAACAAACAACGTCAACAAGATTTGTTGGGTCATTTGTTGAAAGAAAATCACGAGGTTGATGGAAAATTGGAGAAGAAATTAAGCATGAGAGAATTGGTTGATGAATGCAAGACCTTTTTCTTTGGTGGCTATGAGACCACAGCACTTTCGATTGTATGGACTTTGCTGCTTCTATCTATGCATGAAGATTGGCAAAACCAATTGAGAGATGAAATAAAAGAAGTTGTTGGCAATGGTGAGCCTGATATCAACTTGCTTGCTGATTTAAAGAAGATGAAATGGGTGATGAATGAAGCTCTTAGACTCTACCCACCATCACCAAATGTGCAAAGGCAAGCTAAGGAAGACATTCAAGTTGATAATTTAACAGTGCCTAATGGGACCAACATTTGGATTGATGTTGTAGCAATGCACCATGACACAATATTATGGGGAAATGATGCCAACAAGTTCAGACCAGAGAGGTTCAAGAATGATGCTAATGGAGGATGCAACAACTTGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAGCATGTGTTGGTAGGAACTTGACCTTTATGGAGTATAAGATTGTGTTAACCCTACTTCTCTCTAGGTTTAGGTTTAAACTTTCCCCAGTTTATCACCATTCTCCTACTATCATGCTTTCTCTAAGACCCACTTATGGACTTCCTCTTATAGTTCAGACACTTTAG 1575 0.393 MEFIGLSEALVALSSIIVAICLCLLTTLTFFWWILPNQKLQNLKKRGFGGPTPSFPFGNIKDMKSKKSLISSSFSSSFESSILTHDIHSIVSPYYSSWQKSYGKVFVYWLGTEPFLYIADPEFLKKMSTKVLAKKWGKPSVFRNDRDPMFGNGLVMAEGNKWVHHRHVIAPALSPLNLKAMASKMVESTRKMIDRWVSQINSGNLEINVEKEIIATAGEIIARASFGMGDENGKLVFEKLRTLQMTLFMTNRYVGVPFGKFFNVKKTLEAKNLGEEIDKLLLSIIEGRLNSDNKQRQQDLLGHLLKENHEVDGKLEKKLSMRELVDECKTFFFGGYETTALSIVWTLLLLSMHEDWQNQLRDEIKEVVGNGEPDINLLADLKKMKWVMNEALRLYPPSPNVQRQAKEDIQVDNLTVPNGTNIWIDVVAMHHDTILWGNDANKFRPERFKNDANGGCNNLMGYLPFGFGGRACVGRNLTFMEYKIVLTLLLSRFRFKLSPVYHHSPTIMLSLRPTYGLPLIVQTL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00892 524 Gene3D Cytochrome P450 32 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 PRINTS P450 superfamily signature 472 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 PRINTS P450 superfamily signature 463 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 SUPERFAMILY Cytochrome P450 91 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 465 474 IPR017972 GO:0005506|GO:0016705
Rops5g00892 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 27 516 - -
Rops5g00892 524 PRINTS E-class P450 group I signature 462 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 PRINTS E-class P450 group I signature 472 495 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00892 524 Pfam Cytochrome P450 94 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00892 Rops-Chr5 17298872 17302326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00892 1 524 Cytochrome P450 AT5G52400 57.306 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00892 - - gmx:100785284 775.007