Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00849 ATGTCAACTATTCTGCACGGAAGCTCCATATTCTGGTTCTTCCTATCAATGCTTGCATTGATCATCTTACTAGCTTTACCTATCTTCCTAAATCTTCTACCAAAATGGAGTTCCAATTCTTCAATCCAAAAAATCTCACCCCCATCTCCTCCAAGACTCCCAATACTAGGAAATCTCCATCAACTTGGCATGTTCACTCACCACAAACTCAAATCCTTAGCTCAAAGCTATGGCCCCTTGATGTTGCTTCACTTTGGTAAGGTACCAGTCCTTGTTGTCTCAAATACTGAAGCTGCCTGTGAGGTTTTGAAAACTCAAGACCTTGTTTTCTGCAACAGACCACATCGTAAGATGTTTGATATCTTTTGGTATGGTTCTAAAGATGTAGCATCTGCTCCATATGGTAACTATTGGAGACAAGTAAGGAGTATATGTGTCTTACATCTTCTTAGTGCCAAAAAGGTTCAATCTTTTCGTAAAGTAAGAGAAGAGGAAGCTGTCATAATGATTCAAAAAATTAGGCAATGCTCTTCTTTAGGACCATTGAACTTAACTGATTTACTATCTTCAACCACCAATGACATAGTGTGTAGGGCTACCCTTGGAAGGAGATATAGTGAAGAAAGTGGGAGTAAGCTAAGGGAGCCAGTGGCTGAGTTGGAAGTGCTTTTGGGGGCTTCGGTTTTAGGGGACTATATACCTTGGCTTGATTGGTTGGGTAGAGTTAATGGCCTATATGCTAGAGCAAAGAGAGTGGCTAGATTGCTTGATGAATTTATAGATGAAGTTGTTGAAGAGCATGTTGGTGATTGGTTGAAGAGAGGTAATGATGGGCATGCTGATTTGGATGGTGAAAATCTGAATGATTTTGTGGATATTTTGCTGTGGATCCAAAAGACAAATGCCATGGGATTCCCTATTGATAGAACAGTCATCAAGGCTTTGATCATGGATATGTTTGGTGCTGGTACTGATACTACCCTTGCAGTTCTAGAATGGGCAATGACAGAACTCTTGAGGCACCCAAATGTGATGCAAAAACTACAAGATGAGGTGAGGAATGTGGTTGTTGACAGAACTCACATAACTGAGGATGATTTGAACAACATGCATTACTTGAAGGCAGTGATTAAAGAAATTCTTAGATTACACCCCCCATCTCCCTTATTGATTCCAAGGGAATCCATGCAAGATACCAAAGTGATGGGTTATGACATTGCAGCAGGCACACAGGTAATAGTTAATGGTTGGTCTATTGCAACAGATCCTTCATACTGGGATCAACCTCTAGAGTTTCAACCTGAGAGATTCTTGAACAGTTCAATAGATATCAAAGGTCGTGATTTCCAACTTATACCATTTGGAGCAGGAAGAAGAGGGTGTCCAGGAATATCATTTGCCATGGTTGTGAATGAGTTGGTCCTAGCAAACCTTGTTCACCAAATTGATTGGTCACTGCCTGGTGGAGTAATGAGGGATCAGGCATTGGATTTGTCTGAAACTACTGGGTTGACTATTCATAGAAAATTTCCTCTTGTGGCAGTTGCATCCCCACATATATAA 1563 0.4075 MSTILHGSSIFWFFLSMLALIILLALPIFLNLLPKWSSNSSIQKISPPSPPRLPILGNLHQLGMFTHHKLKSLAQSYGPLMLLHFGKVPVLVVSNTEAACEVLKTQDLVFCNRPHRKMFDIFWYGSKDVASAPYGNYWRQVRSICVLHLLSAKKVQSFRKVREEEAVIMIQKIRQCSSLGPLNLTDLLSSTTNDIVCRATLGRRYSEESGSKLREPVAELEVLLGASVLGDYIPWLDWLGRVNGLYARAKRVARLLDEFIDEVVEEHVGDWLKRGNDGHADLDGENLNDFVDILLWIQKTNAMGFPIDRTVIKALIMDMFGAGTDTTLAVLEWAMTELLRHPNVMQKLQDEVRNVVVDRTHITEDDLNNMHYLKAVIKEILRLHPPSPLLIPRESMQDTKVMGYDIAAGTQVIVNGWSIATDPSYWDQPLEFQPERFLNSSIDIKGRDFQLIPFGAGRRGCPGISFAMVVNELVLANLVHQIDWSLPGGVMRDQALDLSETTGLTIHRKFPLVAVASPHI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00849 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Rops5g00849 520 CDD CYP71-like 77 512 - -
Rops5g00849 520 FunFam Cytochrome P450 83B1 35 515 - -
Rops5g00849 520 Pfam Cytochrome P450 47 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 Gene3D Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00849 520 PANTHER CYTOCHROME P450 71B11-RELATED 24 517 - -
Rops5g00849 520 SUPERFAMILY Cytochrome P450 47 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00849 Rops-Chr5 16322541 16326344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00849 48 517 Cytochrome P450 AT3G48270 51.805 4.45e-176 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00849 - - gmx:100813357 744.577