Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00820 ATGCTCCCCGGTTACATGCGGTCAAATTCGCAGAACGTGTCCAATCATGACCGGTCACTACCGTTTTCTGATTACGCTTCCAAAAAGCGACGTTTTGCTCTTTTCAGCTCACGATTTCGATATCCGTATCTGCAATTGTCCAGAATTGACAAGAAAGTAACAATTTTGGGTGCATTTGGTTGCACAGGAGTTTGCCTGGCTCTGGAGAGCTACATAGATTCTAATCACCAAGGTGGCATGACCTCCATGGCACCTTCTCGGGTGGCAGGAGGGTTAATCCGATCATCGTCAAGTTCTGGCATTTTCTTTCAAGGTGACGGGCAGTCACAGAATGTAATTAACTCTCACTTAGGCTCCTCTTTTGTTAACTCATCTAACACGGTTCCTGGGACTGGTCGATCGAACCTGGGACTGGTTTCTGGGGATATGGATAATACAGTTTTGAACAGTGTGCCAAACTCAGCACCAAGTGTTGGAGCTAGTTCTTTAGTCACAGATGCAAATTCTGCACAAACTGGTGGCCCCTATTTGCAGAGAAGTGCAAGCGTTAACACAGACTCATACAGAAGATTACCTGCCTCACCCAGGTCATTTACATCAAATAATATTAGTATTTCTGGGTCACCGGCAATGGATGGTTCCTCTGTAGTACAGCAGAGTTCTCATCAAGATCAGAATGCTCAACAATTGCAGCAGAATCAGCAGCAGCAGCAGCAGCAAGGTGCTTCAAGTGCTATGTCTTTGCCTGCATCTCAAAGTGACCCATCTCCACTCCAGATGGGTGCACAAGTAGCAGGATCTTTCACTCAGGATCCAAATACGGTATCCCAACTTCCAAAGAAACCAAGGCTGGATATCAAGCAGGATGATATAATGCAACAACAGGTAATACAACAGCTTCTTCAGAGACGAAACTCCATGCAATTCCAAGGTCGTGATCCACAGTTACAGGGTTTGCTTCAGCAGCAGCAGAGGCTGAAGCAACAACAAATCTTTCAGTCATTGCCACAGTTACAGCGAGCGCACTTGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAACAACAACAACAACAACAAATGCAATTGAGGCAGCAATTACAGCAACAAAGGATGCAGCCGTCATCTGCCATGAAGCGTCCATATGATAGTGGTGTTGGTGGTGTATGTGCCCGTCGATTGATGCAGTTCCTCTATCATCAAAGGCAGCGACCAAATGATAATAATATTGTCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCATGCAAAGCAACGATGGTGCTTGTCATTATATAATAATGTTGGGCAGCATGTACTTGGTATTTTCCCCCAAGTGGCTATGGATGCATGGCATTGTGACATTTGTGGTTCTAAATCTGGAAAAGGATTTGAGGCAACTTATGATATACTACCTAGGCTTAATGCAATCAAATTTGGCTGTGGACTGATCGATGAACTTCTGTTTTTGGACTTTCCACGTGAAATAAGATGTCCGTCTGGTGCGATGATGTTAGAATATACAAAAGCAGTTCAAGAGAGTGTGTATGAGCAGCTTCGAGTTGTTCGTGAGGGTCATCTTCGTATCATATTCACTCAAGACCTAAAGATATTTTCCTGGGAGTTCTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGGAAGTCGGTTGCACCACAGGTACACCAATTAGTTCAAGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGTCAGATGGGGTTTCTCAGCAAGACTTGCAAACAAACAGTGACATGGTACTGTCAGCTGGGCGTCAGCTTGCAAAGAGTTTGGAGCTACAATCGCTAAATGACTTTGGCTTTTCGAAAAGATTTATGAGAAGTTTGCAGATTTCTGAGGTTTGCAGTAGCATGAAAGATCTTATGGATTACTGTTATGACCACAAAATTGGAGCAATTGAGAGCTTGAAAATTTTTCCTCGAATTGCAACTGCGACAAAGCTCCAGACGCATAAGATGCCAGAGATGGAACAACTAGCAAATGGTCAAGGTCTGCCAACTGATCATAACACGCTAAATAAGCTGATGAATTCGAATCCTGGATGGAACAACCATATAAACAACAATCATAATATGGTTAATCGTGGTGCTTTGAGTGGGTCAGCACAAGCTGCTTTGGTACTGGCCAACTACCAAAATCTCCTCAAGAGGCAAAATTCGATGAATTCAACCCCTGGCTCACTTCAGCGAGAAGGATCCTCTTTCAATAACTCAAACCAGAGTCCCTCTTCAGCTTCGCAAAATGCTGGTACTGCTTTAATTCCAGGTTCAATGCAGAATTCACCTGTTAATGGTTTCCCAAGTCCACGTTTAGCCCCGCAGCAGCAGCAACACCTTCCACAGCGCTCATTAAGTGCAAATAATTTACCACAACAAACTCATTCACAGGGATCCCATGGAAATCAAGCTCTGCAGCAGCAGCAGATGATCCAGCAACTACTGCAGGAGATGTCAAATAACAATGTGGTCGTGCAACCACAGTCTCTTGGTGGTCCCAATGCAAATGGGAATATGGCAAATAATGGGTCACGTTTTGGGGGCCAAAATCCACCCATAAATGGAGGCTCTGGCAATGTTCCGGGGAATAATGGACCTGTTTCAAGGAGCAATAGCTTCAATGGGGCTTCAAACAATGATTCTTCTGCAGCTGGAGGCAACAACGGATTCAACCAGAGAGCATCTGATTCTGATATGTCACAAAATCTCCATTTGCAAGAGGTGGTTCAGGATATTGCCCATGAGTTCACGGATAACCCCTTCTTTAACAGTGATTTAGATGATAACATGGGTTTTGCTTGGAAGGCATGA 2856 0.4443 MLPGYMRSNSQNVSNHDRSLPFSDYASKKRRFALFSSRFRYPYLQLSRIDKKVTILGAFGCTGVCLALESYIDSNHQGGMTSMAPSRVAGGLIRSSSSSGIFFQGDGQSQNVINSHLGSSFVNSSNTVPGTGRSNLGLVSGDMDNTVLNSVPNSAPSVGASSLVTDANSAQTGGPYLQRSASVNTDSYRRLPASPRSFTSNNISISGSPAMDGSSVVQQSSHQDQNAQQLQQNQQQQQQQGASSAMSLPASQSDPSPLQMGAQVAGSFTQDPNTVSQLPKKPRLDIKQDDIMQQQVIQQLLQRRNSMQFQGRDPQLQGLLQQQQRLKQQQIFQSLPQLQRAHLQQQQQQQQQQQQQQQQQMQLRQQLQQQRMQPSSAMKRPYDSGVGGVCARRLMQFLYHQRQRPNDNNIVYWRKFVAEYYSPHAKQRWCLSLYNNVGQHVLGIFPQVAMDAWHCDICGSKSGKGFEATYDILPRLNAIKFGCGLIDELLFLDFPREIRCPSGAMMLEYTKAVQESVYEQLRVVREGHLRIIFTQDLKIFSWEFCARRHEELLPRKSVAPQVHQLVQVAQKCQSTIAESGSDGVSQQDLQTNSDMVLSAGRQLAKSLELQSLNDFGFSKRFMRSLQISEVCSSMKDLMDYCYDHKIGAIESLKIFPRIATATKLQTHKMPEMEQLANGQGLPTDHNTLNKLMNSNPGWNNHINNNHNMVNRGALSGSAQAALVLANYQNLLKRQNSMNSTPGSLQREGSSFNNSNQSPSSASQNAGTALIPGSMQNSPVNGFPSPRLAPQQQQHLPQRSLSANNLPQQTHSQGSHGNQALQQQQMIQQLLQEMSNNNVVVQPQSLGGPNANGNMANNGSRFGGQNPPINGGSGNVPGNNGPVSRSNSFNGASNNDSSAAGGNNGFNQRASDSDMSQNLHLQEVVQDIAHEFTDNPFFNSDLDDNMGFAWKA* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00820 951 MobiDBLite consensus disorder prediction 165 289 - -
Rops5g00820 951 MobiDBLite consensus disorder prediction 365 384 - -
Rops5g00820 951 MobiDBLite consensus disorder prediction 735 797 - -
Rops5g00820 951 PANTHER LIM DOMAIN-BINDING PROTEIN 123 937 IPR029005 -
Rops5g00820 951 Coils Coil 338 373 - -
Rops5g00820 951 Pfam LIM-domain binding protein 393 653 IPR029005 -
Rops5g00820 951 MobiDBLite consensus disorder prediction 165 277 - -
Rops5g00820 951 MobiDBLite consensus disorder prediction 840 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00820 Rops-Chr5 15680834 15688221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00820 378 657 C2H2 Transcription Factor Family AT1G43850 54.643 3.57e-100 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00820 - - gmx:100816886 1155.97