Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00814 ATGTCTGCAGACACCAGAAAGAGTGTCATGTCCAAGAGTTTAGAAAACGGTGCAGCACTCTATATTTTGAAACCCTTTTGTTCAGATGACTTCAAAAACATCTGGGAGTATGCTATGGCTGCAAGGAAAGGGAAACTAGTTGAAAATGAACATTTGAGAAGTGGAGAAGGGGAATCACAAGGTGAGAAGATTTTCTTCCAAGAGGTTAAGTCCTCTACAACATCATCATCAACTGAGCCAAAGGGAAAAAGAAAGAATAGGAAGAGAAAAAGTCAAAAGGAAGATCAAAGTGAAGGAAGGCGTCGGGTTATAAAGAAACCAAAGATGGTTTGGACAACATGCCTTCACAATGCGTTTCTGCATGCCATAAAACAAATTGGATTGGGCAAGGCTGTGCCAAAGAAAATTCTTGAGATCATGAATATCCCAAACTTGACAAGAGAGAATGTTGCCAGTCACTTACAGAAGTATCGTATCTTCCTGAAAAAAATTGCAGGGAGAGGAATAATAGAGGGCTTATCTCAAAGAACTTTAAAGTCAAGGTTTGCTTCAGGTCTTCCAGCATCAGTGATCCAAGACATCAAAACAAGATCTGAGAATCTGCGTCTTCCTGTGAAACAATATTTGAAAAAATTATCATATCAAACAGGAAAAGTAGCAACAGCCCATGCTCTTAAACCTTTCAACAAGGGTCCATTGAGTTTTCTTGATCACCAAGTTTCAAGCAACACATGTGTGACTCCTCAACTTGGAGGAGGTCAATTCCCCTATCCCAATCCATTGCACAATGGCCTGGTGCTTGAAAACCAGCATGGTGATTCTTTGAATCAAGTCAAACTTGGACTAGCAAGCTTTGGAAGCAATATTGGGGTCAATAATATCCACCAAAACATGTTGGGAAGCTATGAAAATGCTGGTGTACATGGTTTGATGACTTCTGCAAATGTCTTAACAGGAGGTTTGAAATATGGTGACCATGTTTACCAAAACTATGGTTCATTGGGAAATCACAACATTAGCCATGATCAAGGAAATTGGAACATGGGATCTTGGAGCAGCTCTAATCTACCTCAGACTAATTATACTTATTATAACTCATCATCTGGTATTCAACTGAATGATGGATCAAAAATGGTTGGGAGTGGGATAGAAGAAGGGTTTAACTGTGTTGGTATGATGGCTACTACTGCAACCAACAATAGCTTTGGCTTCATCAATGGGAATCAAAATGCAAATATGAATGTGTCACCCTTGGGACATGGAAATCTTAGTTTGGTTCAAGGACGGTTTGCTTTTGCTTCTAATAATGCTGGGGATGGATGTGCAAGTGAGCTTCAAACATCATTGATCACTGATGGAACTAGAGAAGAAAATGTTTCATGGATCTCACAATTGCCTCAGGAACTAGATGATTATGTTGTAGAAAAAGAGCATCACTATAATAATGCCAATTCAATCAGTGAGGGTGAGATCAGCCAACTGGAAAATGACCTTTCTGAGCTTTTCTTTATGCTAGATGACATAAATTTTCTTAATGAGACAGAAGAGAACTCTAATGCAAGTGAATTTTTGAATTCTGACTTCTCTAGCTCATGTCACGTTGTGCAAGCCCTTGAGCAGGATTCGGGTATGGAATTTATTGAAGCCTTGTTTGGTACTGAGGCAAACTAG 1671 0.3938 MSADTRKSVMSKSLENGAALYILKPFCSDDFKNIWEYAMAARKGKLVENEHLRSGEGESQGEKIFFQEVKSSTTSSSTEPKGKRKNRKRKSQKEDQSEGRRRVIKKPKMVWTTCLHNAFLHAIKQIGLGKAVPKKILEIMNIPNLTRENVASHLQKYRIFLKKIAGRGIIEGLSQRTLKSRFASGLPASVIQDIKTRSENLRLPVKQYLKKLSYQTGKVATAHALKPFNKGPLSFLDHQVSSNTCVTPQLGGGQFPYPNPLHNGLVLENQHGDSLNQVKLGLASFGSNIGVNNIHQNMLGSYENAGVHGLMTSANVLTGGLKYGDHVYQNYGSLGNHNISHDQGNWNMGSWSSSNLPQTNYTYYNSSSGIQLNDGSKMVGSGIEEGFNCVGMMATTATNNSFGFINGNQNANMNVSPLGHGNLSLVQGRFAFASNNAGDGCASELQTSLITDGTREENVSWISQLPQELDDYVVEKEHHYNNANSISEGEISQLENDLSELFFMLDDINFLNETEENSNASEFLNSDFSSSCHVVQALEQDSGMEFIEALFGTEAN* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00814 556 Pfam Myb-like DNA-binding domain 108 158 IPR001005 -
Rops5g00814 556 NCBIfam myb-like DNA-binding domain, SHAQKYF class 106 159 IPR006447 GO:0003677
Rops5g00814 556 MobiDBLite consensus disorder prediction 67 102 - -
Rops5g00814 556 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 60 379 IPR044841 GO:0003700|GO:0006355
Rops5g00814 556 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Rops5g00814 556 SUPERFAMILY Homeodomain-like 104 163 IPR009057 -
Rops5g00814 556 Gene3D - 103 165 - -
Rops5g00814 556 FunFam Two-component response regulator 102 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00814 Rops-Chr5 15442292 15452735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00814 1 166 Response Regulator Gene Family AT3G16857 38.378 1.84e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops5g00814 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00814 - K14491 aprc:113866677 527.709