Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00805 ATGTTTTGTACATCCCTTTGGTTGGAATTTCAGAGCTTCGACGACCCGCTTTTAGTGCAGCAATCGACGAAGCCCCATCGAAAGGCGTTTTCGTTCATCCTAGAAGGCGCATTTGGTGAATGGAAGTGGATTTTGAATGATGATGCAGATGTGAATGAGGAGTGTCCAACGACAGATTCTGATAATGGGGTTGAGAAAGATGGTGTTTATAAGAGAGTGACAAAGTTGAATGATAATGACATCTTACATTTAGAGTTTGGCAGTGAAGAGGAAGCTATAGAATTTTATAAAATGTATGCAATGTATCATGGATTTGTTGTTAGGAAAGATGATGTGTATAGAGATGTGAAGGGGAAAGTTGTCATGCGGCAATTAGTATGCAATAGATCTGGTTTAAGAAACAAGAAACATATTGAAAAGGTGGACAGAATAAGAGACCATAAACCAATCACGCGGACGAATTGTGATGCAAAGTTTAGGGTCCATTTTAACTACAGTAGTTTGAAATGGAGGGTTGTCTCTTTTCAGAATTCACATAACCATCAACTTACACCACCGGAACATGTTCACCTACTACCTGCTTATCGTAGGTTGACATTTGCAGATGAAGCTCAAGTTGATAGCTTGCATCATTATGGTGTGAGGTCATGTCATATATTGGGTTTCATGGTAGGCCAGAAAGGTGGATATGCAGACTTAGGATTCTGCAAGAAGGACCTATACAATCATCTTGACAAGCAGAGGCGTGCAAAGACTAAAAAAAAACAAAAAACCAAAATGGCAGAGGCATCGTTTAAATGGAATTCAAGAACGGAGAATCACAGCCACCCAACGATTAAAGCGTTTTTGACGGACCTCCAATCTGACCCTGTCTCCGGGTCTCAGATCAAGGTCCCTACAGAATGTGCGCCATCCCGTGGTCAGCCTTGCTTGGTTGGTTTTGATGGGGGTGTATATACAGGTTACAAATCAAGTAGCGTCCCAGTTCAACCTCCAGCAATGCATGATGACAATTGA 1017 0.4149 MFCTSLWLEFQSFDDPLLVQQSTKPHRKAFSFILEGAFGEWKWILNDDADVNEECPTTDSDNGVEKDGVYKRVTKLNDNDILHLEFGSEEEAIEFYKMYAMYHGFVVRKDDVYRDVKGKVVMRQLVCNRSGLRNKKHIEKVDRIRDHKPITRTNCDAKFRVHFNYSSLKWRVVSFQNSHNHQLTPPEHVHLLPAYRRLTFADEAQVDSLHHYGVRSCHILGFMVGQKGGYADLGFCKKDLYNHLDKQRRAKTKKKQKTKMAEASFKWNSRTENHSHPTIKAFLTDLQSDPVSGSQIKVPTECAPSRGQPCLVGFDGGVYTGYKSSSVPVQPPAMHDDN* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00805 338 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 53 254 - -
Rops5g00805 338 Pfam FAR1 DNA-binding domain 94 184 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00805 Rops-Chr5 15310788 15311975 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops5g00805 FAR1 5.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00805 - - ccaj:109792835 243.047