Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00796 ATGGCTAGGCTATATGGGCACCCTAACGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAGGTTTTGTTCATTTGGTGATGGAGCTTTGTGCAGGAGGGGAGCTATTTCACCGATTAGAAAAGCATGGACGGTTTTCTGAATCAGAAGCTAGAGTTCTCTTTAGTCACTTAATGCAGGTGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACAAGAGCCTCCTCATCTCCGATTAAATTGGCAGATTTCGGGCTTGCAACCCCCATTAAGCCTGGACAGAGTTTGCACGGGTTAGTTGGGAGTCCGTTCTATATAGCTCCGGAGGTACTGGCTGGTGTATATAACCAGGCGGCTGATGTATGGAGTGCAGGGGTTATTCTTTACATTCTATTGAGTGGGATGCCTCCATTTTGGGGGAAGACCAAATCACAGATAATTGAAGCTGTTAAGGCAGCTTCCCTAAGATTTCCATCAGAACCTTGGGATCGCATTTCGGAATCAGCTAAAGATTTGATCAGGGCAATGCTGTGTACAGAACATTCTCGAAGGCTCACTGCCAAAGAGGTTTTAGGAATCAGGACATCAGCTTTGGCACTGGATCACCTACTTGTGATGCTCAATCACCTACATTCACATGCAGATCATCATTTTCATCTTTTTTGGTAG 702 0.443 MARLYGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGRFSESEARVLFSHLMQVVLYCHENGVVHRDLKPENILLATRASSSPIKLADFGLATPIKPGQSLHGLVGSPFYIAPEVLAGVYNQAADVWSAGVILYILLSGMPPFWGKTKSQIIEAVKAASLRFPSEPWDRISESAKDLIRAMLCTEHSRRLTAKEVLGIRTSALALDHLLVMLNHLHSHADHHFHLFW* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00796 233 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00796 233 SMART serkin_6 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00796 233 SUPERFAMILY Protein kinase-like (PK-like) 2 203 IPR011009 -
Rops5g00796 233 CDD STKc_CAMK 7 202 - -
Rops5g00796 233 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 205 - -
Rops5g00796 233 Pfam Protein kinase domain 3 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00796 233 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Rops5g00796 233 PIRSF ILK 2 211 - -
Rops5g00796 233 FunFam Phosphoenolpyruvate carboxylase kinase 36 208 - -
Rops5g00796 233 Gene3D Transferase(Phosphotransferase) domain 1 36 227 - -
Rops5g00796 233 ProSitePatterns Serine/Threonine protein kinases active-site signature. 69 81 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00796 Rops-Chr5 15193353 15195020 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00796 1 202 EF-hand Containing Proteins AT3G57530 51.485 1.86e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops5g00796 Pkinase 9.8e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00796 - - gmx:100776088 375.555