Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00793 ATGGCTGTTGCCAAGAGCAACAGCTGCAGTGAACCTAGTACTTCATACAATTGTTACAAAGTAGCAGACTTGACTGAAACCATATTAGACACAAATCATACCTCTAATTTGAAAGATCGATACGTTCTCGGGGAGCAGTTGGGTTGGGGACAGTTTGGTGTCATAAGAGCATGCTCTGACAAGTTGACAGGAGAGGTTTTGGCCTGCAAATCAATTGCTAAAGATAGGTTGGTTACTTTGGATGATCTTAGGAGTGTAAAACTTGAAATTGAGATAATGGCTAGGCTATCTGGGCACCCCAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAGGTTTTGTTCATTTGGTGATGGAGCTTTGTGCGGGAGGTGAGTTGTTTCACCGATTAGAGAAGCATGGACGGTTTTCTGAATCCGAAGCCAGAGTTCTCTTTAGGCACTTAATGCAGGTGGTTTTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACCAGAGCCTCCTCATCTCCGATTAAATTGGCAGATTTCGGGCTTGCAACCCACATTAAGCCTGGACAGAGTTTGCACGGGTTAGTTGGGAGTCCGTTCTATATAGCTCCGGAGGTACTGGCTGGTGCATATAACCAGGCGGCTGATGTATGGAGTGCAGGGGTTATTCTTTACATTCTATTGAGTGGGATGCCTCCATTTTGGGGGAAGACCAAATCACAGATATTTGAAGCTGTTAAGGCAGCTTCCCTGAGATTTCCATCAGAACCTTGGGATCGCATTTCTGAATCAGCTAAAGATTTGATCAGGGCAATGCTGTGTACAGAACCTTCTCGAAGGCTCACTGCCAAAGAGGTTTTAGATCATTGCTGGATGAAATGCAATCAAACAAATCCTGTACAACTAAGAGAACATGAAACCCAAAATTGTGAAGAATGGGATGTTGGTGGCAGCTCATTCTCTACCCCTTTTATGCCCAGGAATCAGGACATCAGCTTCGGCACTGGATCACCTACTTGTGATGCTCAATCACCTACATTCACATGCAGATCATCATTTTCATCTTTTTTGGTAGAACCAGTGACTCCTTGTTTAGTTTCTGGTGGGTTTTCATTTCAGAGCACAGGTGATTCCGCTGGTTTGGAATTTTCTTCGCCTGTTCCCTCGATGCTCAGCTTTTCATTTCTCAGCCCGAGTTCTCTTGTTGAGCAAAAGAGTTGTAAATTAGAATGCTCAGCTAACATGTCAAATGTAAATGCAATTGCTGGAGAAGCAAGGATGGGGAAGTTGATTTTACTACCAGATTCTCCACTGGAAAATGATGTTAAAGAAAAGGATGACAAGCCTGGAGAGACTAAAAGGGCAGGTGGAATGAATGGACATCATAGAGTATTGGGAATCCACAGTAAGAGAAACAGAACAATTGGACTTGGTGAGTGTGATCAACTTGACCTTGTGGTGACTGAATCAGTCATCCGTTGGTCATCATGCACTCAACTTCCTACATCTTTGAGATCATCTCTTGTCTGCTAA 1554 0.4331 MAVAKSNSCSEPSTSYNCYKVADLTETILDTNHTSNLKDRYVLGEQLGWGQFGVIRACSDKLTGEVLACKSIAKDRLVTLDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEGFVHLVMELCAGGELFHRLEKHGRFSESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRASSSPIKLADFGLATHIKPGQSLHGLVGSPFYIAPEVLAGAYNQAADVWSAGVILYILLSGMPPFWGKTKSQIFEAVKAASLRFPSEPWDRISESAKDLIRAMLCTEPSRRLTAKEVLDHCWMKCNQTNPVQLREHETQNCEEWDVGGSSFSTPFMPRNQDISFGTGSPTCDAQSPTFTCRSSFSSFLVEPVTPCLVSGGFSFQSTGDSAGLEFSSPVPSMLSFSFLSPSSLVEQKSCKLECSANMSNVNAIAGEARMGKLILLPDSPLENDVKEKDDKPGETKRAGGMNGHHRVLGIHSKRNRTIGLGECDQLDLVVTESVIRWSSCTQLPTSLRSSLVC* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00793 517 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Rops5g00793 517 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00793 517 MobiDBLite consensus disorder prediction 445 465 - -
Rops5g00793 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 309 - -
Rops5g00793 517 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00793 517 SUPERFAMILY Protein kinase-like (PK-like) 38 368 IPR011009 -
Rops5g00793 517 CDD STKc_CAMK 40 298 - -
Rops5g00793 517 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Rops5g00793 517 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Rops5g00793 517 MobiDBLite consensus disorder prediction 445 468 - -
Rops5g00793 517 Gene3D Transferase(Phosphotransferase) domain 1 128 323 - -
Rops5g00793 517 FunFam Calcium-dependent protein kinase 1 43 126 - -
Rops5g00793 517 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00793 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00793 Rops-Chr5 15158188 15161497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00793 24 306 EF-hand Containing Proteins AT3G57530 48.763 1.59e-96 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Rops5g00793 Pkinase 4.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00793 - - gmx:100776088 886.33