Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00791 ATGGGTAAAGGGGGGATGGCAATTGATGATCATGGAAAAGGCAAAGATGGTGAACAAGAGAATATGGCTGCTTGGCTTGTTGGTATTAACACTCTCAAGATTCAACCTTTCAAACTTCCCACTCCGGGACCCCATGATGTTAGAGTTAGAATGAAGGCTGTTGGAATTTGTGGGAGTGATGTTCACTACCTCAAGACAATGAGATGTGCAGACTTTATTGTTAAAGATCCAATGGTTATTGGTCATGAGTGTGCTGGGATCATTGAAGAAGTTGGTAGTGAGGTAAAAAATTTGGTGCCTGGTGACCGTGTGGCAATTGAGCCTGGGATCAGTTGTTGGCGTTGTGACCCTTGCAAAAAGGGTAGATATAATTTATGCCCTGATATGAAGTTTTTTGCAACTCCACCAGTGCATGGTTCCCTGGCTAATCAGATAGTGCATCCAGCAGACCTATGTTTTAAACTGCCAGACAATGTGAGCTTGGAGGAGGGGGCAATGTGTGAACCCTTAAGTGTTGGTGTTCATGCTTGTAGAAGAGCTAATGTTGGACCAGAAACAAATGTGTTGATCATGGGAGCAGGACCAATAGGACTTGTTACAATGCTTGCAGCTCGCGCTTTTGGGGCACCCAGGATAGTCATTGTGGACGTGGATGACCATCGTTTATCTGTTGCAAAAACTCTTGGTGCAGATGATATTGTTAAAGTTTCAACAAAGATTCAGGATGTAGCTGAAGAAGTTCTTCAGATACATAAGGTTATGGGAGCTGATGTAGATGCTACCTTTGATTGTGCTGGTTTTGACAAAACCATGTCAACAGCACTGACTGCTACTAAGCCAGGTGGCAAAGTTTGCCTAGTGGGAATGGGTCATTCTGAGATGACTGTCCCACTCACCGGAGCTGCTGCAAGGGAAGTTGATGTGATTGGCGTTTTCCGCTATATGAACACATGGCCTCTTTGCCTTGAGTTCCTAAGGAGTGGCAAAATTGATGTGAAACCCCTTATAACTCACAGGTTTGGGTTCTCTCAGAAAGAAGTGGAAGAAGCCTTTGAAACTAGTGCTCGTGGTGGTAATGCCATTAAGGTCATGTTCAATCTTTAG 1104 0.442 MGKGGMAIDDHGKGKDGEQENMAAWLVGINTLKIQPFKLPTPGPHDVRVRMKAVGICGSDVHYLKTMRCADFIVKDPMVIGHECAGIIEEVGSEVKNLVPGDRVAIEPGISCWRCDPCKKGRYNLCPDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVLIMGAGPIGLVTMLAARAFGAPRIVIVDVDDHRLSVAKTLGADDIVKVSTKIQDVAEEVLQIHKVMGADVDATFDCAGFDKTMSTALTATKPGGKVCLVGMGHSEMTVPLTGAAAREVDVIGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00791 367 SUPERFAMILY GroES-like 21 193 IPR011032 -
Rops5g00791 367 FunFam Sorbitol dehydrogenase 172 312 - -
Rops5g00791 367 Gene3D - 32 353 - -
Rops5g00791 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 331 IPR036291 -
Rops5g00791 367 Pfam Zinc-binding dehydrogenase 195 325 IPR013149 -
Rops5g00791 367 SMART PKS_ER_names_mod 28 365 IPR020843 GO:0016491
Rops5g00791 367 Gene3D - 172 312 - -
Rops5g00791 367 Pfam Alcohol dehydrogenase GroES-like domain 44 155 IPR013154 -
Rops5g00791 367 CDD sorbitol_DH 23 366 IPR045306 GO:0016616
Rops5g00791 367 PANTHER SORBITOL DEHYDROGENASE 19 367 - -
Rops5g00791 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 81 95 IPR002328 GO:0008270|GO:0016491
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00791 34 298 Monolignol Biosynthesis Gene Families AT4G37980 27.536 8.05e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00791 K00008 - gmx:100791559 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00791 5 15096646 15101702 Rops5g00791 5 15096646 15101702 ECH