Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00787 ATGGCTCTTCTGTCACCAAAAAGCATTTTTCCAATTATTCTGCTCTTCTTGACATTATCAGTATCAGAGCTTGAAGCTCACTATTATGACAAAACATGTCCACAAGTGGAGAAAATCATTTCAGAAACTGTTCTCACTGCTTCTACAAATGATCGAAAAGTCCCAGCTCGTATTTTGAGGATGTTCTTCCATGACTGTTTCATACGGGGTTGTGATGCATCAATATTGCTGGACTCAACTTCTACAAACAAGGCAGAAAAAGATGGCCCTCCTAATGTCTCCGTTGGATCATTCTATGTTATTGATGATGCTAAAGCCAAGCTTGAGAAAGCTTGCCCACACACTGTTTCATGTGCTGATATCATAGCCATTGCAGCTAGAGATGTGGTTGCCTTGTCTGGAGGTCCATATTGGAATGTGCTAAAAGGAAGGAAAGATGGAAGGGTGTCAAAGGCATCAGAAACCACCAACTTACCTACTCCAACTTTTAATGTGAGCCAACTCATTCAAAGCTTTGCAAAGAGAGGTTTAGGAGTTAAAGATATGGTAACTCTATCAGGTGGTCACACACTTGGCTTTTCACATTGTTCTTCTTTTGAAGCCCGCCTTCATAACTTTAGTTCTTTGCATCAAATTGATCCAAGCTTGAACACTGAGTTTGCACTGAACCTAAGAAAGAAGTGTCCAAAACCACACACAAACCCAAATGCTGGACAGTTCCTTGATTCAACATCATCAGTGTTTGATAATGATTATTACAGACAACTATTGGCAGGGAAAGGTGTGCTTTCTTCAGATCAATCACTTGTTGGTGATTATAGAACTAGATGGTTTGTTGAAGCATTTGCCAAAGATCAGGGTTTGTTCTTCAAAGAGTTTGTAGGTTCAATGTTGAAGCTTGGAAATGTTGGGGTGTCTGAAAATGGGGAAGTGAGACTTAATAGCAGGATTGTGAATTGA 960 0.4 MALLSPKSIFPIILLFLTLSVSELEAHYYDKTCPQVEKIISETVLTASTNDRKVPARILRMFFHDCFIRGCDASILLDSTSTNKAEKDGPPNVSVGSFYVIDDAKAKLEKACPHTVSCADIIAIAARDVVALSGGPYWNVLKGRKDGRVSKASETTNLPTPTFNVSQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFEARLHNFSSLHQIDPSLNTEFALNLRKKCPKPHTNPNAGQFLDSTSSVFDNDYYRQLLAGKGVLSSDQSLVGDYRTRWFVEAFAKDQGLFFKEFVGSMLKLGNVGVSENGEVRLNSRIVN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00787 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Rops5g00787 319 Gene3D - 27 319 - -
Rops5g00787 319 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PANTHER PEROXIDASE 25-RELATED 17 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 FunFam Peroxidase 27 167 - -
Rops5g00787 319 ProSiteProfiles Plant heme peroxidase family profile. 23 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 SUPERFAMILY Heme-dependent peroxidases 24 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 Pfam Peroxidase 44 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops5g00787 319 Gene3D Peroxidase, domain 2 159 300 - -
Rops5g00787 319 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Rops5g00787 319 FunFam Peroxidase 159 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00787 Rops-Chr5 14904037 14907648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00787 9 319 Peroxidase AT5G51890 70.794 3.36e-169 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00787 K00430 - gmx:100795422 513.072