Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00786 ATGGGTAAAGAGAGGTATTGGGCTGGAAAATTTTCCAAGAGAGGTGGAGGAGAAGGAGCTGAAGCAGAAACAACAACCCCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCATTTCACTTTCCTACCATAAACCACCACCACCAACAAACCTCTTTCAAGTCACCCTCTTGCATCCAAGAAGACCATAGTACTGTCCCAAAAGGTGCTGAAGCACCTAGGAATAGCTTGGAATCAGAGGATGGTACAGTTTCATCTCTCTCAAAAGAAGAAGATTTTAAAATCCCAAAGCAAATACAAATCAAAACAAGTGGAAGCACAAGAACAAGTGGTGGAAATTTGAATGATTTGTCCTCAGAAATCAGCAGCTCTCCAGGGACAAAGACACCAACTTTGGTTGCTAGATTAATGGGTCTGGATCTTCTTCCAGGTGCAAACTCACCCTCTTCTTCTTCTTCTTCATGTCTTTCCACTCCAAACCCACAAGGCAATATTCCACATATGCACCACCTTAGACCCAGGCAACACATCCAAACCAAACCCAGAAACAGCATAGACAGTAGTGAAATTGCAGCCACTCATTCCTTGCCTGAGACTCCTAGAATATCCTCTTCAAGAAGATCAGATGTTGATCATCATAGACTCTCTCTTCAAATCAACAAGGAGAATATGATGAGCCTTAGTGAGGACTTGGAGCTCCCAAGGTTTTCATTTTCAAAAAGGAAATGTGATGAGAACAATATTAGGAGTCCAAGCCATTATGCAAGGCAAATTGTTAAACAGGTTAAGGAAAGTGTGAGTAGAAAAGTTGGACAAGACATCACCAACACTCTCAAAAGTAGAGAACTAGCAAGAGAAGAATTTGGAGGCCAATTAAGAATCAAGAAATCTCCCAAGACATCATTGAAAGTACTTGATCAATCCAGCCCAGGAAAGCAATCAAACTCATCCTACTCCCCAAGGCTCAGATTCTTGGACACCAAAAACAAGGCAAGCACAACATCATCATCACCACTCAGTACAAAAGATCAAAACACTCACCCCACTATGCTGAAACCACCACCACCACCACCAAAAAATCAAAACACTCACCCTACTCAATCACAGCTTCCAAGAGTTTTAACAAAGCCTCAAGCATTGCTAGAGCAACAAGAATCAAGGAACCAGAAATCAGTGCCAAAGAGCAAAAAGGTTACCAATGAAAAGTTCAGCTCAAGGCTCAAAAAGCCTCCACAGACATCAGACATAATCAGAAACAAGCAAGAAGAGTCATTCATCATTCGTCCAACATCACCTACCAGAGCCAATGACATCAAAACCACCAAAAGCAAGAAAACTCACACATTATCAAGCAATCTCCTCAACATCAACACTGTTCCAAATCTTCTCCCTGTCAAGACAGACCCTTCTCCTCCAGCAACCAAAATTCCTCAAAAACAGGTATCTGATACCCAAGAGTCCAAACGCAGTTCACAGTTATCTAGTTGTTCGCGCCAGAGGTACAAACAAGAAGGAACAAACACACTCGACACCCAAGAAATCAACAACAACAATGAAGACAAACTTAACGGTGCCGGAGCTAAAGAAGATCACAAACCAGAATTTCAGTACATCACAGAAATCTTAAACCGTACCACAAACGCAATATCTTTCAACCAATGTTCCTCTCTAACTCATCCATTAGACCCATCAATTTTTCACCAACTTGAACACCACCCCACTTCCACTTCCAACATTTTCTCACCAAATAACAATAAAGATCGAATCTTTACCCAAAAAAATCAACTGGGTCACCGTTGGAATCGGAGATTACTGTTTGATTTGGTAGATGAAGTTTTAAAAGAGATTTTGAAGCCAAAAGGAAGTGAAAAAAGATATTTGTTTTTGCATGGGTATTGCTACCAAGGGAGTGTTGAAGAGTTAAGAGAAAGGGTGTGGAAGAGGGTTGAGGAGTTCCCATGTGCAAAGTGTGAGGTTTTGGATGACATTGATGCTTTGATTGAATCAGAAGACATGGAGAAAGTGAAGGTGGAAAGCGATGAAGAAGAAGAAAGGTTGGTGGAAGAGATTGAAGGGAACATATGGGACACGTTGGTGCATGAAACTGTTATGGTTATGGACCATTGTCGTGGAAGTGAAAAGTGGGGTCCATGTGTAAAAAACGACGGCGTCGTTTTGTAA 2193 0.4145 MGKERYWAGKFSKRGGGEGAEAETTTPSGCMCAVFQFFDFHPFHFPTINHHHQQTSFKSPSCIQEDHSTVPKGAEAPRNSLESEDGTVSSLSKEEDFKIPKQIQIKTSGSTRTSGGNLNDLSSEISSSPGTKTPTLVARLMGLDLLPGANSPSSSSSSCLSTPNPQGNIPHMHHLRPRQHIQTKPRNSIDSSEIAATHSLPETPRISSSRRSDVDHHRLSLQINKENMMSLSEDLELPRFSFSKRKCDENNIRSPSHYARQIVKQVKESVSRKVGQDITNTLKSRELAREEFGGQLRIKKSPKTSLKVLDQSSPGKQSNSSYSPRLRFLDTKNKASTTSSSPLSTKDQNTHPTMLKPPPPPPKNQNTHPTQSQLPRVLTKPQALLEQQESRNQKSVPKSKKVTNEKFSSRLKKPPQTSDIIRNKQEESFIIRPTSPTRANDIKTTKSKKTHTLSSNLLNINTVPNLLPVKTDPSPPATKIPQKQVSDTQESKRSSQLSSCSRQRYKQEGTNTLDTQEINNNNEDKLNGAGAKEDHKPEFQYITEILNRTTNAISFNQCSSLTHPLDPSIFHQLEHHPTSTSNIFSPNNNKDRIFTQKNQLGHRWNRRLLFDLVDEVLKEILKPKGSEKRYLFLHGYCYQGSVEELRERVWKRVEEFPCAKCEVLDDIDALIESEDMEKVKVESDEEEERLVEEIEGNIWDTLVHETVMVMDHCRGSEKWGPCVKNDGVVL* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00786 730 MobiDBLite consensus disorder prediction 393 408 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 148 168 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 409 441 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 305 352 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 293 532 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 477 526 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 147 216 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 367 392 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 182 207 - -
Rops5g00786 730 Pfam Domain of unknown function (DUF4378) 538 705 IPR025486 -
Rops5g00786 730 Pfam DUF761-associated sequence motif 122 151 IPR032795 -
Rops5g00786 730 MobiDBLite consensus disorder prediction 103 134 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 449 468 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 56 134 - -
Rops5g00786 730 MobiDBLite consensus disorder prediction 1 25 - -
Rops5g00786 730 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00786 Rops-Chr5 14887553 14891324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00786 103 728 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.678 3.29e-53 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00786 - - gmx:100791539 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00786 5 14887553 14891324 Rops5g00786 5 14887553 14891324 ECH
Rops5g00786 5 14887553 14891324 Rops6g02814 6 50482872 50485437 PCT