Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00783 ATGTCCAATCAAACCATTGATCCATATCAGCACATTCAAATCATCCACAACCCCGATGGCACTTTCACTCGCTTATTTGAGGTTCCACGCACATCACCTTCATCAGACACCACTCTTCCAACCTCTGTTCTCACCAAGGATCTCACCATAAACCAATCAAACAACACCTGGGTTCGATTATTCCTACCCAGAAATGCAATGTCAAACCTTAACAACCACAAGCTACCTCTCATTGTTTTCTTCCATGGTGGTGGCTTCATCATATTTAGTGCAGCTTCCACCATATGCCATGACTTGTGTGTTGAAATGGCAGATATTGCTGGAGCCATTGTTGCCTCAGTTGAATATCGCCTCGCGCCGGAGCACCGGTTTCCGGCGGCATATGATGATGCTATGGAAGCATTACATTGGATCAGAAAAACTCAAGATGAGTGGTTAACACAATATGTTGATTATTCTAATTGTTATCTAATGGGGAGTAGTGCTGGTGCTACCATTGCTTATCATGCAGGTCTTCGTGCTGTAGAAGAGGTGAATCTTCTTGAGCCATTGAAGATCCAAGGGTTGATATTGCGTCAACCATTTTTTGGTGGGATCAAGAGGACTGAATCAGAGTTGAGGTTTGAGAATGATGCTGTTATACCACTGTGTGTTAATGGTTTGATGTGGGAGTTGGCACTGCCAATTGGGGTTGACCGTGATCATGAGTATTGCAATCCAACGGCTGGGAATGGTGTTGGTGAGAAATTGGACAAAATAAGAGAACTTGGGTGGAGGGTATTGGTGAGTGGGAATGGTGGGGACCCACTGGTAGACCGTGGGAAGGAGATGGTGCAGTTGATGGAGGAGAAAGGGGTACAAGTGGTGAAGGATTTTCAAGAAAAAGGTTTCCATGCGATAGAGTTTCTTGATCCCTCCAAAGCAAAGCAACTCATTGGGTTGGTGAAAGGTTTCATTTTCTCATTTGGTGGTTAG 975 0.4462 MSNQTIDPYQHIQIIHNPDGTFTRLFEVPRTSPSSDTTLPTSVLTKDLTINQSNNTWVRLFLPRNAMSNLNNHKLPLIVFFHGGGFIIFSAASTICHDLCVEMADIAGAIVASVEYRLAPEHRFPAAYDDAMEALHWIRKTQDEWLTQYVDYSNCYLMGSSAGATIAYHAGLRAVEEVNLLEPLKIQGLILRQPFFGGIKRTESELRFENDAVIPLCVNGLMWELALPIGVDRDHEYCNPTAGNGVGEKLDKIRELGWRVLVSGNGGDPLVDRGKEMVQLMEEKGVQVVKDFQEKGFHAIEFLDPSKAKQLIGLVKGFIFSFGG* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00783 324 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 78 94 IPR002168 GO:0016787
Rops5g00783 324 Gene3D alpha/beta hydrolase 9 321 IPR029058 -
Rops5g00783 324 PANTHER ARYLACETAMIDE DEACETYLASE 30 301 - -
Rops5g00783 324 Pfam alpha/beta hydrolase fold 78 299 IPR013094 GO:0016787
Rops5g00783 324 SUPERFAMILY alpha/beta-Hydrolases 17 319 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00783 Rops-Chr5 14698596 14699570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00783 19 310 Carbohydrate Esterase AT5G16080 37.209 1.92e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00783 - - gmx:100795069 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00783 5 14698596 14699570 Rops5g00783 5 14698596 14699570 ECH
Rops5g00783 5 14698596 14699570 Rops6g02820 6 50591229 50593910 PCT