Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00782 ATGTCCAAGCAAGCAATCGATCCATATCAGCATCTCCAAATCGTTCTCAATCCAGACGGCACGCTCACACGTTTATTTGATGATCCACACACCTTACCTTCATCAGACACCACTCTTCCAATCTCTGTTCTTACCAAGGATGTCACCATCAACCCATCAAACAACACCTGGGTTCGATTATTCCTACCCAGAAATGCAATATCGAACCTTAACAACAACCACAAGCTACCTCTAATTGTTTTCTTTCATGGTAGTGGCTTCATCATACAAAGTGCAGCTTCCACCATGTTCCATGACTTCTGTGTGGAAATGTCAGATAGTGTTGGAGCCGTTGTTGCTTCTGTTGAATACCGCCTCGCGCCGGAGCACCGGTTGCCGGCGGCGTATGATGATGGCATGGAAGCGTTGCATTGGATAAGAAAAACCCAAGATGAGTGGTTGACACAATATGCTGATTATTCGAATTGTTATTTAATGGGAGGTAGTGCTGGGGCTACAATTGCATATCATGCTGGTCTTCGTGTCTTAGAAGAGGTAAATCTTCTTGAACCATTGAAGATCAAAGGGTTGATATTGCGTCAACCTTTTTTTGGTGGGATCAAGAAGACTGAGTCAGAGTTGAGGCTTGGGAATGACCCTTTTCTCCCCTTGAGGGCTAGTGATTTGATGTGGGAACTGGCACTGCCAATTGGGGTTGACCGTGATCATGAGTATTGTAATCTAAGGGCTTTGGATTGTCTTGATGAAAAATTTGATAAGATTAGAGAACTTGAATGGAGGGTATTTGTGAGTGGGAATGGTGGGGACCCACTAGTGGACCGTGAGAAGGAGCTGGCCCAGTTGATGGAAGAGAAAGGGATGCAAGTGGTGAAGGACTTTCAAGAAGAAGGTTACCATGGGATAGAATATTTTGAGTCCTCCAAAGCAAAGCAACTTATTGGGTTAGTGAAAAGTTTCATTTCCTCATTTGATGGTTAG 978 0.4417 MSKQAIDPYQHLQIVLNPDGTLTRLFDDPHTLPSSDTTLPISVLTKDVTINPSNNTWVRLFLPRNAISNLNNNHKLPLIVFFHGSGFIIQSAASTMFHDFCVEMSDSVGAVVASVEYRLAPEHRLPAAYDDGMEALHWIRKTQDEWLTQYADYSNCYLMGGSAGATIAYHAGLRVLEEVNLLEPLKIKGLILRQPFFGGIKKTESELRLGNDPFLPLRASDLMWELALPIGVDRDHEYCNLRALDCLDEKFDKIRELEWRVFVSGNGGDPLVDREKELAQLMEEKGMQVVKDFQEEGYHGIEYFESSKAKQLIGLVKSFISSFDG* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00782 325 Pfam alpha/beta hydrolase fold 79 300 IPR013094 GO:0016787
Rops5g00782 325 SUPERFAMILY alpha/beta-Hydrolases 33 320 IPR029058 -
Rops5g00782 325 PANTHER ARYLACETAMIDE DEACETYLASE 17 301 - -
Rops5g00782 325 Gene3D alpha/beta hydrolase 9 323 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00782 Rops-Chr5 14690534 14691587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00782 9 240 Carbohydrate Esterase AT5G16080 39.837 7.96e-52 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00782 - - gmx:100795069 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00782 5 14690534 14691587 Rops6g02821 6 50596716 50597231 PCT
Rops6g02820 6 50591229 50593910 Rops5g00782 5 14690534 14691587 PCT