Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00779 ATGTCCAATCAAACCATTGATCCATACAAATACATTCAAATCTTCCCCAACACAGATGGCACATTCACTCGCTTATTTGATGCTCCACGCACCTCACCCTCATCAGATCCCACTCTTCCAACCTCTGTTCTCACTAAAGATCTCACCATCAACCCATCAAACAACACCTGGGTTCGATTATTCCTACCCAGAAAAGCAATGTCAAACCTTAAAAACCACAAGCTACCTCTCATTGTTTTCTTCCATGGTAGTGGCTTCATCTTGCTCAGTGCAGCTTCCACCATATGCCATGACTTCTGTGTTGAAATGGCAGACACTGTTGAAGCCGTTGTTGCCTCCGTCGAATACCGTCTTGCACCGGAGCACCGGTTACCAGCGGCGTATGATGATGCCATGGAATCGTTGCATTGGATCAGCAAAACCCAAGATGAGTGGTTAACAAAATATGTTGATTATTCTAATTGTTATCTAATGGGGAGTAGTGCTGGTGCTACCATTGCATACCATGCAGGTCTACGTGCAGTGGAAGAGGTTGATCTTCTAGAGCCATTGAAGATCCAAGGGTTGATATTGCGCCAACCGTGCTTTGGTGGGACAAAGAGGACTGAATCAGAGTTGAGGCTTGAGAATGACCCTGTTATACCATTGTGTGTTAATGATTTGATGTGGGAGCTTGCATTGCCAATTGGGGTTGATCGTGATCATGAGTATTGTAATCTAAGGGCTTTGGATGGTCTTGATGAGAAGCTGGGTAAGATGAGGGAGCTTGGGTGGAGAGTATTGGTGAATGGGAATGGTGGGGACCCACTGGTGGATCGTGAGAAGAAGCTGGTGGAGTTGATGGAGGAGAAAGGGGTGCAAGTGGTGAAGGACTTTCATGAAGAAGGTTCCCATGGGAATGGGAATGGGATACACCATTTTGATCCTTCAAAATTAATACAACTCTTTGGGTTAGTGAAAGGTTTTATTTGGAATAATGATATTTAA 987 0.4468 MSNQTIDPYKYIQIFPNTDGTFTRLFDAPRTSPSSDPTLPTSVLTKDLTINPSNNTWVRLFLPRKAMSNLKNHKLPLIVFFHGSGFILLSAASTICHDFCVEMADTVEAVVASVEYRLAPEHRLPAAYDDAMESLHWISKTQDEWLTKYVDYSNCYLMGSSAGATIAYHAGLRAVEEVDLLEPLKIQGLILRQPCFGGTKRTESELRLENDPVIPLCVNDLMWELALPIGVDRDHEYCNLRALDGLDEKLGKMRELGWRVLVNGNGGDPLVDREKKLVELMEEKGVQVVKDFHEEGSHGNGNGIHHFDPSKLIQLFGLVKGFIWNNDI* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00779 328 Gene3D alpha/beta hydrolase 9 326 IPR029058 -
Rops5g00779 328 Pfam alpha/beta hydrolase fold 78 299 IPR013094 GO:0016787
Rops5g00779 328 SUPERFAMILY alpha/beta-Hydrolases 21 323 IPR029058 -
Rops5g00779 328 PANTHER ARYLACETAMIDE DEACETYLASE 24 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00779 Rops-Chr5 14653511 14654497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00779 12 312 Carbohydrate Esterase AT5G16080 35.783 2.30e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00779 - - gmx:100795069 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02821 6 50596716 50597231 Rops5g00779 5 14653511 14654497 PCT