Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00778 ATGCCCCTCTTTTCTTTGTCAATCTCAAAATGTTTTTTTGGAACTGCAATTGCATTTGCATTTGCATTATCCTTAAGTTTGCTCTTCATTGTAAACTCATCCACACTCCATTCACCATCTCCAAATCCATGCAATAATGATCCCTACAAGCAACTCAACCTCATCCTTAACCCAAATGGCACAGTCACTCGCCCACAGAAACCCCCAGAGAGCCCTCCCTCACCTGATCCCACCCACAACAACATCCTCGTACTCTCCAAAGACCTTACCATCAACCAATCTAAAGGCACGTGGGCCAGGATCTACCTACCCCGCAAAGCACTGGATCATAGCTCAAAGCTCCCTCTAGTGGTTTTCTTCCATGGGGGTGGGTTCATCTTCCTCAGTGCAGCCTCAACTATCTTCCATGACTTTTGCTTCAACATGGCAAACGACGTCGTAGCGGTTGTTGCATCAATAGAGTACCGTCTTGCACCAGAACATAGACTCCCTGCGGCGTATGAAGATGCCGTGGAGGCGCTGCACTGGATCAAAACCAACCAAGCAGATGATTGGTTGAGGTACTATGTTGATTATTCCAATGTTTTTCTTATGGGGAGTAGTGCAGGAGGAAACATAGCATACAACGCGGGTCTACGTGTAGCTGCGGGTGGTGATCAAAATTCTATGAACATCAAAGGGTTAATATTGGTTCAACCCTATTTTGGTGGGACCCTTAGGACAGGCTCAGAACTGAGGCTGGCGAATGAACCGCATCTAACACTGTGCACTAATGATATGATGTGGAAATTATCGTTACCCGATGGGGTTGACCGTGATTATGAGTATTGCAATCCAACGGTGGGGAATGGTCCTGCGAGATTGGAGAAGATCAGACGGCTTGGATGGTGGGTATTGGTGACCGGCTGTGGCGGTGACCCACTTGTGGATCGTCAATTGGGGCTGGTGAGATTGATGGAGAAGGAGGGTGTGAGAGCAGTGGGACATTTCACTCCCGGAGATTATCATGGGGTTCAAGATAGTGAGCCTTTGAAAGCAAAGCAACTCTTTGGGGTAATCAAAAGTTTCATTTCATCTTTGCCTTCTCATGATTGA 1095 0.4712 MPLFSLSISKCFFGTAIAFAFALSLSLLFIVNSSTLHSPSPNPCNNDPYKQLNLILNPNGTVTRPQKPPESPPSPDPTHNNILVLSKDLTINQSKGTWARIYLPRKALDHSSKLPLVVFFHGGGFIFLSAASTIFHDFCFNMANDVVAVVASIEYRLAPEHRLPAAYEDAVEALHWIKTNQADDWLRYYVDYSNVFLMGSSAGGNIAYNAGLRVAAGGDQNSMNIKGLILVQPYFGGTLRTGSELRLANEPHLTLCTNDMMWKLSLPDGVDRDYEYCNPTVGNGPARLEKIRRLGWWVLVTGCGGDPLVDRQLGLVRLMEKEGVRAVGHFTPGDYHGVQDSEPLKAKQLFGVIKSFISSLPSHD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00778 364 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 117 133 IPR002168 GO:0016787
Rops5g00778 364 PANTHER ARYLACETAMIDE DEACETYLASE 59 337 - -
Rops5g00778 364 Gene3D alpha/beta hydrolase 49 360 IPR029058 -
Rops5g00778 364 Pfam alpha/beta hydrolase fold 117 338 IPR013094 GO:0016787
Rops5g00778 364 MobiDBLite consensus disorder prediction 60 79 - -
Rops5g00778 364 SUPERFAMILY alpha/beta-Hydrolases 67 344 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00778 Rops-Chr5 14639264 14640358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00778 59 328 Carbohydrate Esterase AT5G16080 38.571 8.18e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00778 - - gmx:100792597 538.88