Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00776 ATGTCTCTGGTTTTCTTTTGCACTAGGACTTCCAACAACGAGAATAGAGACTATCCACGGGAAATGTACACATTGAAGGAGTTGCTTCGGGCAACAAACAACTTTCATCAAAATAATAGATTGGACGAGATTGCAGTGAAGCGCTTGGATAAGATGGTTGTAAAGCAGTGGAAGTGGAAGCACTTGGAAGAGTATTTGTACCATGAATCAACTCCTCAAATCACACACGGAGATATAAAGGCAAGCAATGTTCTTTTAGACTCTGGATTTCAAGCTAAGGTTGCTGATTTTGGTTTTGCAAAGTTGAAACCAAATGGCACAACCCATTTTGCCAAGTTTATAGCTACCCGAGGATATCTTTCACCAGAATATGTTTATGGGAATTTTTCTAAGAGCTCTGATGTTTACAGCCTTGGAATATTGCTTTTGGAGATTATTAGTGCAAAGAATCCTAATGAGAAACTCACAGGGAAGTGA 477 0.392 MSLVFFCTRTSNNENRDYPREMYTLKELLRATNNFHQNNRLDEIAVKRLDKMVVKQWKWKHLEEYLYHESTPQITHGDIKASNVLLDSGFQAKVADFGFAKLKPNGTTHFAKFIATRGYLSPEYVYGNFSKSSDVYSLGILLLEIISAKNPNEKLTGK* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00776 158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Rops5g00776 158 SUPERFAMILY Protein kinase-like (PK-like) 64 153 IPR011009 -
Rops5g00776 158 SMART serkin_6 1 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00776 158 Pfam Protein kinase domain 53 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00776 158 Gene3D Transferase(Phosphotransferase) domain 1 21 157 - -
Rops5g00776 158 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00776 158 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 65 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00776 Rops-Chr5 14575125 14577515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00776 65 149 Receptor kinase-like Gene Family AT2G48010 54.023 2.77e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Rops5g00776 Pkinase 6.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00776 - - sspl:121791237 153.68