Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00775 ATGCAATTGAAACGTTACTGTTGTTTCCACTTAGATGAAAGGCAAAGCGAAATAAAGACTTCCAACAAGGAGAATAGGGACTATCCATGGGAAATGTACACATTGAAGGAGCTGCTTCGTGCAACAAACAACTTTCATCGAAATAATAAGATTGGACAAGGTGAGTTTGGAAGTGTCTATTTTGGTAGAACAAGTGAAGGGGTTCAGATTGCAGTGAAGCGCTTGGATAAGATGGTTGTAAAGGCAGAGATGGAGTTAACAGTGGAAGTGGAAGCACTTGGAAGAGTGAGGCATAAGAATTTGTTGGAATTGAGAGGATTCTATGTAGGGGAAAAGGAAAGCTTAATTGTCTATGATTACATGCCTAATCATAGCTTGCTCACTCATTTGCACGGTCCACTCTCTAAGGAATGTCAGCTAGATTGGTCTAGAAGAATGAGTATAGCAATTGGAGTAGCTGAAGCCTTAGCGATAGCTCTTAGATGTGTTGATAGTAGCATGGGGAAGAGGCCTAGCATGACAGAGGTTGTACATTGGCTTAAAGGTGGTGTAGGAAGAAGAGATTCCAATTTTCACTAA 579 0.4093 MQLKRYCCFHLDERQSEIKTSNKENRDYPWEMYTLKELLRATNNFHRNNKIGQGEFGSVYFGRTSEGVQIAVKRLDKMVVKAEMELTVEVEALGRVRHKNLLELRGFYVGEKESLIVYDYMPNHSLLTHLHGPLSKECQLDWSRRMSIAIGVAEALAIALRCVDSSMGKRPSMTEVVHWLKGGVGRRDSNFH* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00775 192 Pfam Protein tyrosine and serine/threonine kinase 47 156 IPR001245 GO:0004672|GO:0006468
Rops5g00775 192 ProSitePatterns Protein kinases ATP-binding region signature. 51 81 IPR017441 GO:0005524
Rops5g00775 192 PANTHER OS01G0253100 PROTEIN 22 157 - -
Rops5g00775 192 Gene3D Phosphorylase Kinase; domain 1 7 120 - -
Rops5g00775 192 FunFam PTI1-like tyrosine-protein kinase At3g15890 17 120 - -
Rops5g00775 192 SMART tyrkin_6 45 191 IPR020635 GO:0004713|GO:0006468
Rops5g00775 192 SUPERFAMILY Protein kinase-like (PK-like) 21 157 IPR011009 -
Rops5g00775 192 ProSiteProfiles Protein kinase domain profile. 45 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00775 Rops-Chr5 14492697 14494093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00775 41 156 Receptor kinase-like Gene Family AT4G23230 46.552 1.76e-28 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Rops5g00775 PK_Tyr_Ser-Thr 9.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00775 - - gmx:100793659 254.988