Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00772 ATGCAATCCCGGCGGCTCCTCCCATCTCAGCCGTCCACGTCATACCAACCACCACAAACACCTCCTCCTCATGCTCTTCACAACTACCACCACCACCACTTACTAATCCCTCTCCTCGCTGCCACCGCCTCCGCGGCAGTCGCCCTCCTCCTCATCGCCGTCCTCTGCCGCCGCACCCTCACCAGAAAACGTACCGCTCCATTCTTCTCCGACTCACCACCCCACCGCTTCACCTACTCCTTCCTCCGCCGCGCCACCGACTCTTTCTCCCTCCGCCTCGGCCACGGCGGCTTCGGTACCGTCTTCGCCGGAACCCTCCCGGCACCTTCACGCAAACCCATTGCTGTCAAGCTCATGGACTCATCCTCCCACCAAGGGGAACGCGAGTTCCACAACGAACTCTTCTTCGCTTCGAGGCTCCGCTCCCTCCAAGTCATCGCCGCCATGGGATTCTCCTCAGACCCAAAACGACGCCGTTTCCTCCTCGTCTACCACCTCATGCAAAACGGCAATCTCCAAGACGCGCTTTTGCGACGAAAGTGCCCTGAACTCTTCAATTGGAATAAGCGTTTCGCCATTGCTTTGGACATAGCAAAAGGAGTCCACTATCTTCACTCCCTCGACCCCCCAGTTATCCATGGAGACATAAAACCAAGTAACATCTTGCTTGATCGTGATTTCTCCGCTAAAATTGGCGATTTTGGACTTGCCCGGTTGAAATCGGAGCCACCCCAACTCGAATTAGATCTTTTGAACGGTGATTTTAGTGATGAAGAGAAGAAAAAGAAGGATGATTTGGAGTGTGATGGTGGTGGGGTTGTGATTGATGATTGTGGATCGATGGAAAGTGTGCATACTGGTTTTTTAGATGAAGGGAATTTGGGTGTGGAGCAATCTCCTACTAGTGTTCAGAGTGAGAAGGATGTTGTTAAGAGGAATGGGAAAGGGTTAAAGAGTAATTCAGTGAAGGAATTGTGGTGGAAACAGGATAACGAGGATGAGGCTTCGGGTTCAATGCAAGTTGGTGAAGGAAAGAAGGTGAAGGATTATGTGATGGAGTGGATTGGAAGGGAGGTGAATGAGGAAAAGGTGAAGAGTGAATTGGTAGGAGGGAAGATGGGGAAGGAAGAGAAGAAGAAGAAAAAGAAGAGGAAGCAACATTTGGAATGGTGGGAATCAATGGATGAGGAAAAGGTTGATGCTTTTGTGAAGAAAGAGAAGAGAAGGCCAGCTAGGGAATGGTGGAAGGAGGAGTACTGTGAAGAGCTTGCAAAGAGGAAAAAGAAGAAGAAGAAAAAGAAAAAGGGTGTAGAGAGTGATAACAATGTTGATGATTGGTGGATGAGTGATGATGATGCATTATATGGGGAAAGAAAGAAGAACAAGAGAAGAAGCAGGAATAACCGTGGTAGTGTGGATTGGTGGTTAGATGGGTTCAGTGGTGAGCTATGGAGAGCACGTAGGAATAGCTTTGATTCTGCTAGTGGTGAAATTCCAAAGAGTGGTGGTGTGAGTAGTACTCCAAGTATGAGGGGAACTGTTTGTTATGTTGCTCCTGAGTATGGCTGTGGTGGAGATGTTTCAGAGAAGTGTGATGTATATAGTTTTGGGATCTTGTTACTTGTTATCATTTCTGGGAGGCGCCCACTTCAGGTGACTGGTTCACCATTATCAGAGTTTCAGAAAGCGAATCTTTTGTCCTGGGCACGCCATTGTGCTAAAAATGGGAAGCTCATTGAGCTGGTTGATCAATCTATCCAGTCAGTGGATCAAGAGCAGGCTCTTCTCTGTATTAAGGTGGCTTTGCTTTGTTTGCTTAAGTCACCGGCTCGTCGTCCTTCAATGAAGGAGGTTGTGGGAATGCTTAGTGGGGAATTGGATCCACCCCAATTGCCTGTTGAGTACTCACCTTCAACCCCATCTCGCTTCCCTTTCAAGTCTAGGAAAAAAGGACCGTGA 1959 0.487 MQSRRLLPSQPSTSYQPPQTPPPHALHNYHHHHLLIPLLAATASAAVALLLIAVLCRRTLTRKRTAPFFSDSPPHRFTYSFLRRATDSFSLRLGHGGFGTVFAGTLPAPSRKPIAVKLMDSSSHQGEREFHNELFFASRLRSLQVIAAMGFSSDPKRRRFLLVYHLMQNGNLQDALLRRKCPELFNWNKRFAIALDIAKGVHYLHSLDPPVIHGDIKPSNILLDRDFSAKIGDFGLARLKSEPPQLELDLLNGDFSDEEKKKKDDLECDGGGVVIDDCGSMESVHTGFLDEGNLGVEQSPTSVQSEKDVVKRNGKGLKSNSVKELWWKQDNEDEASGSMQVGEGKKVKDYVMEWIGREVNEEKVKSELVGGKMGKEEKKKKKKRKQHLEWWESMDEEKVDAFVKKEKRRPAREWWKEEYCEELAKRKKKKKKKKKGVESDNNVDDWWMSDDDALYGERKKNKRRSRNNRGSVDWWLDGFSGELWRARRNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPEYGCGGDVSEKCDVYSFGILLLVIISGRRPLQVTGSPLSEFQKANLLSWARHCAKNGKLIELVDQSIQSVDQEQALLCIKVALLCLLKSPARRPSMKEVVGMLSGELDPPQLPVEYSPSTPSRFPFKSRKKGP* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00772 652 MobiDBLite consensus disorder prediction 293 314 - -
Rops5g00772 652 ProSitePatterns Protein kinases ATP-binding region signature. 93 117 IPR017441 GO:0005524
Rops5g00772 652 Gene3D Phosphorylase Kinase; domain 1 74 165 - -
Rops5g00772 652 SUPERFAMILY Protein kinase-like (PK-like) 68 641 IPR011009 -
Rops5g00772 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Rops5g00772 652 MobiDBLite consensus disorder prediction 1 26 - -
Rops5g00772 652 MobiDBLite consensus disorder prediction 624 652 - -
Rops5g00772 652 ProSiteProfiles Protein kinase domain profile. 87 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00772 652 PANTHER OS07G0586332 PROTEIN 3 650 IPR044576 -
Rops5g00772 652 SMART serkin_6 87 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00772 652 Gene3D Transferase(Phosphotransferase) domain 1 167 267 - -
Rops5g00772 652 Pfam Protein tyrosine and serine/threonine kinase 91 240 IPR001245 GO:0004672|GO:0006468
Rops5g00772 652 Pfam Protein tyrosine and serine/threonine kinase 508 621 IPR001245 GO:0004672|GO:0006468
Rops5g00772 652 Gene3D Transferase(Phosphotransferase) domain 1 489 628 - -
Rops5g00772 652 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00772 Rops-Chr5 14384279 14386959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00772 484 619 Receptor kinase-like Gene Family AT3G58690 31.206 1.99e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Rops5g00772 PK_Tyr_Ser-Thr 1.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00772 - - lja:Lj2g3v0473820.1 905.975