Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00764 ATGGTTCTCCAAATTCCATCTCTAGCCTTTACAGTAAAAAGGCACCAACCTGAGTTAGTAGGCCCAGCTAACCCTACTCCCCGTAAGCTTAAACTGCTATCTGACTTAGATGACCAAAGTGGTCTCCGTAACCATGTTCCATTCGTATATTTCTATCGTTACCAGCCTTGGATGGCAGGGAAAGACCCTGTTCGAGTCATTAGACAAGCACTGGCCAAAACACTTGTGTTTTATTACCCATTCGCTGGAAGGCTTAGGGAAGCTCCTAGGGGCAAACTAATGGTAGATTGTACAGGGGAAGGTGGCATGTTCATTGAGGCTGATGCAGATGTGACTCTTGAGCAGTTTGGTAATAATCTTCTTCCCCCATTTCCATGCTTTGATGAGCTCCTTTACAATGTTCCAGGTTCAGATGGAATCATTGGCTGTCCGCTACTGCTTATACAGGTGACACGCCTCAAGTGTGGTGGTTTCATCTTTGCTCTCCGCATGAACCATACAATGAGCGATGGAAGTGGAATTTCCAAGTTCCTGAAGGCCTTAGCAGAAATAGCACGCGGGGCAGCACAACCTTCCATTCTCCCCGTGTGGCGTAGAGAGCTACTATGTGCAAGAGACCCACCAAGAGTTACATGCATCCATAGGGAATACAAACAACTACCACCTGACACCAAAAGCATCTTTGAACCCCATCATCGTTCCTTCTTCTTTGGACCCAAAGAGATAGCTGCAATGCGTGGTCTTCTTCCTTATCACCTTGCTCAATCAACCTCCTTCGAGATCCTCACGGCATGCTTATGGCGATGCCGCACAAAAGCATTGCAGTGGCAAAATCCCGATCAAGAGGTTCGCTTGTTGTGTATTGTCAATGCACGTTTTGGACGTTGCACCGTCAACCCTCCATTGCCTGAAGGTTTTTACGGCAACGCTTTTGTTTTCCCGGCGGCTGTTACCACTGTAGCGAAACTGTGTGGTCGGCCCTTAGAGTATGCCTTAGAGTTAGTGAAGAAGGCAATGAATGAAGCGACTGAGGAGTATGTGAACTCAGTGGTAAACCAAATGGCTACAAAAGGAAGACCCTGTTTTACTTTGTTAGGGTCTTTTATGGTATCTGATCTCTCAAAGGCTGCTTTAAGACATGTGGACTTTGGATGGGGCAACGCTGTGTATGCTGGGGTGGCCAAGGCTGGTCTTGGGGACATTCCTCTAGTGAGCTTCTATAATCCCTTTACCAATTCCAAAGGAGAGCAAGGTAGAGTGGTTCCTATTTGCCTGCCAGAAGATGCCATGGAGAGGTTTGAGAAAGAGTTGGATCACACACTCAAGTTCAAGACAAACAAATTAATGTCCTGTCTCTGA 1359 0.468 MVLQIPSLAFTVKRHQPELVGPANPTPRKLKLLSDLDDQSGLRNHVPFVYFYRYQPWMAGKDPVRVIRQALAKTLVFYYPFAGRLREAPRGKLMVDCTGEGGMFIEADADVTLEQFGNNLLPPFPCFDELLYNVPGSDGIIGCPLLLIQVTRLKCGGFIFALRMNHTMSDGSGISKFLKALAEIARGAAQPSILPVWRRELLCARDPPRVTCIHREYKQLPPDTKSIFEPHHRSFFFGPKEIAAMRGLLPYHLAQSTSFEILTACLWRCRTKALQWQNPDQEVRLLCIVNARFGRCTVNPPLPEGFYGNAFVFPAAVTTVAKLCGRPLEYALELVKKAMNEATEEYVNSVVNQMATKGRPCFTLLGSFMVSDLSKAALRHVDFGWGNAVYAGVAKAGLGDIPLVSFYNPFTNSKGEQGRVVPICLPEDAMERFEKELDHTLKFKTNKLMSCL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00764 452 Gene3D - 7 217 IPR023213 -
Rops5g00764 452 Gene3D - 218 437 IPR023213 -
Rops5g00764 452 Pfam Transferase family 12 439 - -
Rops5g00764 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00764 Rops-Chr5 14279297 14282744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00764 19 437 Monolignol Biosynthesis Gene Families AT5G48930 29.748 4.95e-44 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00764 K19861 K13610 gmx:100795237 704.131