Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00761 ATGGGCGCCACAAGAATCAGGAATAGGTCTATTACTTGTAAACTCCTTGGCAAAAATGGAAAGCACCATGTGGTTGCGGGCACTGTCTTCAACCAGTTGTTCAACTTCCATAGGCTACATGATTACATGACTGATCTTGCAAGGAAACACAAGACTTACAGGTTGCTAAACTTTTCCAGGGGTGAGGTTTACACTGCAGACCCTGTTAATGTTGAATATATCCTCAAAACAAACTTTGCCAACTATGGGAAGGGACAGTACCAGTATGAGATCTTGAGGGACCTACTGGGTGATGGGATATTCACAGTGGATGGAGAGATGTGGAAACATCAGAGAAAAGTTGCAAGCTATCAATTTTCTTCAAAGATGTTGAGAGACTACAGCAGTTCAGTGTTCAAATCCAATGCAGTAAAACTTGCTGCAATAGTGACTGAAGCATCAATCTCAAATAAGTCAATTGAAATCCAAGATCTGTTTTCTAAATCAACAATGGACTCTGTATCTGAAATTGTCCTCGGTGTAGAGCTGGACACTATTTGTGGAACTTATGAGGAAAGCACCAGGTTCTCCAATGCTTTTCATGAAGCAAGTGCAATTACAATACTACGCTATATTGATATTTTCTGGAAGATCAAACGGTTTCTGAACATAGGATTAGAAGCATCACTCAAGAAGTACGTCAGAGAAATAGATGAATTTGTGTATAAGATAATTAAAAACAAGACAGAGCAAGTACAAAACTCAGAAGAGAAGCCTGAAAGGAAAGACCTTTTGTCAAGGCTTTTAGAATTTGAAGAGACGGATCCAAAGTACCTAAAAGACATGATCCTTAGTTTTGTCATTGCTGGAAAGGATTCAACATCCACCACTCTCTCTTGGTTCCTTTACATGCTCTGCAAGCATCCTCATATGCAGGAAAAGATTGTACAGGAAGTGAAAATGGCAACAAGGTTACAAGATTTGTCAACACCTGAGGAGCTTGCAACTAGCATGACTGAAGAAATTCTTGAAAAGATGCAGTATCTACATGCAGCTTTGACTGAGACACTCAGACTCTACCCAGCAGTTCCATGGGATGCTAAGATTTGTTTTTCAGATGATACTTGGCCAGATGGATTTAGTGTGAACAAAGGTGATTTAGTGGCATACGAATCTTATGCAATGGGCAGGTTAAAATCATTATGGGGTGATGATGCTGAGGAATTCAAACCAGAAAGATGGCTTGACAATAATGGAAATTTCCAGCAAGAAAGCTCTTTCAAATTCACAGCTTTTCAGGGTTTTTCCCTCCCATTTGAAACCCTCGACATTCAGATCCAATGTCTTTCACTTCTCGAACAGCGACGAGGTCTTCGCCGACGGAATCTGCTTCTCCACGGTGGCGAGGAGCTCAACGCGCGGGAGCTAAGGTGTAGGACGCTGGCGAGCTCAAAGAAATTTGGAAAGGGGAAGAGGCCCAGAAAAGGTGAGAATCACTTTTGGAAATCCATTGGGCTTGGTTTTAAGACTCTCAGGGATGCCATTGATGATGTAGGAAGCGATTCTTTTCCTCCAAGTGTTTGA 1563 0.4152 MGATRIRNRSITCKLLGKNGKHHVVAGTVFNQLFNFHRLHDYMTDLARKHKTYRLLNFSRGEVYTADPVNVEYILKTNFANYGKGQYQYEILRDLLGDGIFTVDGEMWKHQRKVASYQFSSKMLRDYSSSVFKSNAVKLAAIVTEASISNKSIEIQDLFSKSTMDSVSEIVLGVELDTICGTYEESTRFSNAFHEASAITILRYIDIFWKIKRFLNIGLEASLKKYVREIDEFVYKIIKNKTEQVQNSEEKPERKDLLSRLLEFEETDPKYLKDMILSFVIAGKDSTSTTLSWFLYMLCKHPHMQEKIVQEVKMATRLQDLSTPEELATSMTEEILEKMQYLHAALTETLRLYPAVPWDAKICFSDDTWPDGFSVNKGDLVAYESYAMGRLKSLWGDDAEEFKPERWLDNNGNFQQESSFKFTAFQGFSLPFETLDIQIQCLSLLEQRRGLRRRNLLLHGGEELNARELRCRTLASSKKFGKGKRPRKGENHFWKSIGLGFKTLRDAIDDVGSDSFPPSV* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00761 520 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00761 520 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00761 520 PANTHER CYTOCHROME P450 16 427 - -
Rops5g00761 520 CDD CYP86A 51 427 - -
Rops5g00761 520 Pfam Cytochrome P450 35 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00761 520 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00761 520 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00761 520 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00761 520 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00761 520 SUPERFAMILY Cytochrome P450 25 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00761 520 Gene3D Cytochrome P450 22 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00761 Rops-Chr5 14203018 14207904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00761 18 466 Cytochrome P450 AT2G45510 46.398 1.20e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00761 - - csin:114293922 568.155