Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00756 ATGACATTACTGTTTGGTCAAATGATTGATAGCTTCGGCAGTAACCAGCAAAGCTCCGACGTAGTGGATCAAGTGTCCAAGGAAACAAATACTGGAGAAGTTATAGGGAGAATGTCAGGTGATACGGTTCTCATACAAGATGCTATGGGTGAGAAGGTTGGGAAATTTCTACAGCTAATAGCAACATTCATTGGAGGCTTTGTGATAGCCTTTGTTAAAGGGTGGCTTCTTACAGTTGTCATGTTGTCCACTCTTTCACTTCTTGTTGTGTCAGGTGCTGCTATGGCCTTCACCATAGGCAAGATGGCTTCCTGA 315 0.4349 MTLLFGQMIDSFGSNQQSSDVVDQVSKETNTGEVIGRMSGDTVLIQDAMGEKVGKFLQLIATFIGGFVIAFVKGWLLTVVMLSTLSLLVVSGAAMAFTIGKMAS* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00756 104 SUPERFAMILY ABC transporter transmembrane region 27 101 IPR036640 GO:0005524|GO:0016020
Rops5g00756 104 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 28 104 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops5g00756 104 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 28 104 IPR039421 -
Rops5g00756 104 Gene3D ABC transporter type 1, transmembrane domain 1 104 IPR036640 GO:0005524|GO:0016020
Rops5g00756 104 Pfam ABC transporter transmembrane region 22 96 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00756 Rops-Chr5 14088222 14089045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00756 28 104 Calmodulin-binding Proteins AT2G36910 35.065 6.73e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00756 K05658 - gmx:100777909 139.813