Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00750 ATGGCTAAGGATGTTGAGGTTGCTGAGCGTGGCTCCTTCTCTGGAAAGGACTACCATGACCCTCCTCCTGCACCTCTCATTGATGCTGAGGAGTTAACGAAGTGGTCCTTTTACAAGGCACTCATTGCTGAGTTCATTGCCACTTTGCTTTTCCTTTACGTGACTGTGTTGACTGTGATTGGGTACAATAGACAGAATGATGTAAAAGCTGGTGGTGATGCTTGTGGAGGAGTTGGTGTCTTTGATCCGAGCTATCATGTACATGGTGGCTCGATTAGCTTGGGAGCTATCTGTGGAGTTGGGTTGGTCAAGGCCTTCCAAAAGTCTTACTACAACAGGTATGGTGGTGGGGCTAATTCTCTCAATGATGGATACAGCACTGGTGTTGGTTTGGGTGCTGAGATCATTGGTACCTTTGTTTTGGTATACACTGTGTTCTCTGCTACTGATCCTAAGAGGAGTGCTAGAGATTCCCATGTGCCGGTTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCATGGTTCATTTGGCCACCATCCCAGTCACTGGTACCGGTATTAACCCAGCTAGGGGTCTTGGAGCTGCTGTTATCTACAACCAAGACAAGCCTTGGGATGACCATTGGATCTTTTGGGTTGGACCATTCGCTGGAGCAGCCATTGCAGGCTTCTACCACCAATTCATCTTAAGAGCTGGTGCAGTCAAGGCTCTTGGATCATTCAGGAGCAACCCTACTGTTTGA 744 0.4798 MAKDVEVAERGSFSGKDYHDPPPAPLIDAEELTKWSFYKALIAEFIATLLFLYVTVLTVIGYNRQNDVKAGGDACGGVGVFDPSYHVHGGSISLGAICGVGLVKAFQKSYYNRYGGGANSLNDGYSTGVGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARGLGAAVIYNQDKPWDDHWIFWVGPFAGAAIAGFYHQFILRAGAVKALGSFRSNPTV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00750 247 Gene3D Glycerol uptake facilitator protein. 93 247 IPR023271 -
Rops5g00750 247 Gene3D Glycerol uptake facilitator protein. 24 85 IPR023271 -
Rops5g00750 247 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00750 247 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00750 247 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00750 247 PRINTS Major intrinsic protein family signature 133 151 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00750 247 Pfam Major intrinsic protein 31 69 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00750 247 Pfam Major intrinsic protein 94 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00750 247 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 82 IPR034294 -
Rops5g00750 247 SUPERFAMILY Aquaporin-like 31 231 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00750 Rops-Chr5 13923451 13924317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00750 1 247 Major Intrinsic Protein MIP AT3G53420 66.202 5.58e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00750 K09872 - gmx:100817292 415.231