Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00749 ATGGCTAAGGATGTTGAGGTTGCTGAGCGTGGCTCCTTCTCTGGAAAGGACTACCATGACCCTCCTCCTGCACCTCTCATTGATGCTGAGGAGTTAACGAAGTGGTCCTTTTACAGGGCACTCATTGCTGAGTTCATTGCCACTTTGCTTTTCCTTTACGTGACTGTGTTGACTGTGATTGGGTACAATAGACAGAATGATGTAAAAGCTGGTGGTGATGCTTGTGGAGGAGTTGGTATTCTTGGGATTGCATGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACTGCTGGGATTTCAGGTGGTCACATCAATCCAGCAGTGACATTTGGGCTGTTCTTGGCTCGCAAGGTGTCTTTGATCCGAGCTATCATGTACATGGTGGCTCAGTGCTTGGGAGCTATCTGTGGAGTTGGGTTGGTCAAGGCCTTCCAAAAGTCTTACTACAACAGGTATGGTGGTGGGGCTAATTCTCTCAATGATGGATACAAAGACTTGGCGTTGGTTTGGGTGCTGAGATCATTGGTACCTTTGTTTTGGTATACACTGTGTTCTCTGCTACTGATCCTAAGAGGAGTGCTAGAGATTCCCATGTGCCGGTTTTGGCTCCACTTCCCATTGGATTTGCTGTGTTCATGGTTCATTTGGCCACCATCCCAGTCACTGGTACCGGTATTAACCCAGCTAGGAGTCTTGGAGCTGCTGTTATCTACAACCAAGACAAGCCTTGGGATGACCATTGGATCTTTTGGGTTGGACCATTCGCTGGAGCAGCCATTGCAGCCTTCTACCACCAATTCATCTTAA 813 0.4797 MAKDVEVAERGSFSGKDYHDPPPAPLIDAEELTKWSFYRALIAEFIATLLFLYVTVLTVIGYNRQNDVKAGGDACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQKSYYNRYGGGANSLNDGYKDLALVWVLRSLVPLFWYTLCSLLLILRGVLEIPMCRFWLHFPLDLLCSWFIWPPSQSLVPVLTQLGVLELLLSTTKTSLGMTIGSFGLDHSLEQPLQPSTTNSS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00749 270 SUPERFAMILY Aquaporin-like 31 160 IPR023271 -
Rops5g00749 270 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00749 270 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00749 270 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00749 270 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Rops5g00749 270 Gene3D Glycerol uptake facilitator protein. 24 197 IPR023271 -
Rops5g00749 270 Pfam Major intrinsic protein 31 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops5g00749 270 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 167 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00749 Rops-Chr5 13909255 13910067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00749 1 166 Major Intrinsic Protein MIP AT2G37170 81.928 6.08e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00749 K09872 - gmx:100817292 307.375