Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00745 ATGAGGAACAAACAGAAGTATCAAGTTCAGAAAAGCACCGTGAAGCTTGTTCCTGAGAAGAGAGCACATTCACATGAAGAAACAAAGTATCCAGTTTCTGAAGCTTCCCCAGCTCCGCCGGAATCTCGCCGGATAATCAACAATAAGCCGCGTCGAGCCTTACGAATTCCGTCAAGTTCCCAATCTCCGGCGAAATGCCACCCACATAGGGACGGTGACGAAGCAAACAAAACTAGTAGATCTTCTCCATCAGGAAAAAGAAGAAGTCTGTCACGAACAATTACCTTGATTGTTGTGCTCACATTGGTTTCAATGATACTCCTCTTTGTTGGCTACTATTTGCTAAAGAGAGAATCAAGAAAGAGTTTCAGGACAATTCTCAGAGAAAACTTTGGTCATGAAGGTGCCACTTTAGAGCCATTGCAATTTGATTTAGCTATAATTGAAGCAGCAACCAATAACTTTTCAGATGAGAATTGCATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTCCTAATGGGAGACAAATAGCAGTAAAAAGACTCTCAAGAAACTCTAGACAAGGTGCAACTGAGTTCAAGAATGAAGTTTTACTGATAGCCAAACTTCAGCACAGAAATCTTGTGGCATTCGTTGGTTTTTGCCTTGAAGAACAAGAGAAAGTACTTATTTACGAATTCGTGCCGAACAAGAGCCTTGATCATTTTTTATTTGACTCTCAACAACAGAAGTTCTTAAGCTGGTTTCAACGTTACAATATTATAAGAGGAATTGCTCAAGGAATTCTTTATTTACATGAACATTCTCGACTCAAAGTTATACATCGTGATCTCAAGCCTAGTAATATTCTATTAGATGAAAATATGATACCAAAAATCTCAGATTTTGGTTTGGCTAGAATTGTTGAAATGAATGAAGACAAAGGAAATACAAATAGAATTGTTGGCACATTAGGTTATATGTCTCCAGAATATGCAATGCTAGGACAATTTTCTGACAAATCCGATGTTTATAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGGAAAAAAGAACAGGTGTAAAATTTAG 1083 0.3777 MRNKQKYQVQKSTVKLVPEKRAHSHEETKYPVSEASPAPPESRRIINNKPRRALRIPSSSQSPAKCHPHRDGDEANKTSRSSPSGKRRSLSRTITLIVVLTLVSMILLFVGYYLLKRESRKSFRTILRENFGHEGATLEPLQFDLAIIEAATNNFSDENCIGKGGFGEVYKGILPNGRQIAVKRLSRNSRQGATEFKNEVLLIAKLQHRNLVAFVGFCLEEQEKVLIYEFVPNKSLDHFLFDSQQQKFLSWFQRYNIIRGIAQGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEMNEDKGNTNRIVGTLGYMSPEYAMLGQFSDKSDVYSFGVMVLEIITGKKNRCKI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00745 360 CDD STKc_IRAK 161 355 - -
Rops5g00745 360 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 116 230 - -
Rops5g00745 360 PIRSF TyrPK_CSF1-R 13 253 - -
Rops5g00745 360 PIRSF TyrPK_CSF1-R 240 356 - -
Rops5g00745 360 Pfam Protein kinase domain 156 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00745 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Rops5g00745 360 Gene3D Phosphorylase Kinase; domain 1 119 230 - -
Rops5g00745 360 SMART serkin_6 155 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00745 360 FunFam Lectin-domain containing receptor kinase A4.3 231 359 - -
Rops5g00745 360 ProSitePatterns Protein kinases ATP-binding region signature. 161 183 IPR017441 GO:0005524
Rops5g00745 360 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 57 357 - -
Rops5g00745 360 SUPERFAMILY Protein kinase-like (PK-like) 138 355 IPR011009 -
Rops5g00745 360 MobiDBLite consensus disorder prediction 66 81 - -
Rops5g00745 360 MobiDBLite consensus disorder prediction 1 87 - -
Rops5g00745 360 MobiDBLite consensus disorder prediction 16 30 - -
Rops5g00745 360 Gene3D Transferase(Phosphotransferase) domain 1 231 359 - -
Rops5g00745 360 ProSiteProfiles Protein kinase domain profile. 155 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00745 Rops-Chr5 13603765 13610016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00745 104 356 Receptor kinase-like Gene Family AT3G45860 61.328 4.82e-106 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g00745 Pkinase 6.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00745 - - gmx:100806048 471.47