Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00744 ATGCTCTTCTCATTTGGCTACCACTGGTTAAGGAGAAAAGCAAGAAAAAGATATAAGACTATTCTCAAGGAAAATTTTGGTCAAGAATATGCCTCATTAGAGCCATTACGGTTTGAACTAACTGTAATTAAAGCAGCAACCAACAACTTTGCATATGGGAACAAGATTGGCAAAGGTGGATTTGGAGAAGTTTACCAGGGTATTCTTCTTGATGGACGACAAATAGCAGTAAAGAGATTGTCAAAAAGTTCTAAGCAAGGTGCAAATGAGTTCAAGAATGAAATTTTATTGATAGCCAAGCTTCAACATAGAAATCTAGTGACATTCATCGGTTTCTGTCTCGAAGAACAGAAGAAAATACTTATTTATGAATACGTGCCGAACAAGAGCCTTGATTACTTGTTATTTGGTTTGGCACTCTTGATCTTAAACTTCTTAACTAGTCAATGA 450 0.3578 MLFSFGYHWLRRKARKRYKTILKENFGQEYASLEPLRFELTVIKAATNNFAYGNKIGKGGFGEVYQGILLDGRQIAVKRLSKSSKQGANEFKNEILLIAKLQHRNLVTFIGFCLEEQKKILIYEYVPNKSLDYLLFGLALLILNFLTSQ* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00744 149 Gene3D Phosphorylase Kinase; domain 1 11 125 - -
Rops5g00744 149 ProSiteProfiles Protein kinase domain profile. 50 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00744 149 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 11 125 - -
Rops5g00744 149 SUPERFAMILY Protein kinase-like (PK-like) 24 139 IPR011009 -
Rops5g00744 149 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 137 - -
Rops5g00744 149 Pfam Protein kinase domain 52 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00744 149 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00744 Rops-Chr5 13552139 13552753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00744 6 138 Receptor kinase-like Gene Family AT4G23160 51.880 1.29e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g00744 Pkinase 4.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00744 - - gmx:100782505 212.231