Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00741 ATGCAAGTTGAGGATGTTGGTTTTTTAAATCAAAAGGGTTTGGATGCTTATGACTCCTTTGGTGCTTACTCTCAACATGGGGACCACGCCATCGAAGCTGGACAAGAAGCTGGCGGGCTCAACGGTCAACCCGAGTTGGGCCGCGGACTCTCATTGGGTCACTCTCCAAAGCAAGACTCACGCGATGTTGCGGCTCTGGGTACTTTTTCCAATCAGAGGTTATTACCCTCTATTGCCAGAGTTGGTCAAGAATGTGCCCCTTTAGAGTCATGGCAGTTTGATTTGACTACAATTAAAGCAGCAACCAACAACTTTGCTGATGAGAATAAGATTGGCAGAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTTCTTGACGGACGACAAATAGCTGTAAAGAGACTGTCAACAAGTTCTAACCAAGATTCTCAAAGGCACAAGTTGTTAAGTTGGTTTCAACGTTACAATACCATAAGAGGAATTGCCCGAGGAATTGTTTATTTACACGAACAATCACGACTCAAAGTTATACATCGTGATCTCAAACCCAGTAATGTTCTGTTAGATGAAAATATGACTCCAAAAATTTCAGATTTTGGTCTAGCTAGAATTGTTGAAATAAATCAAGACCAAGGAAGTACAAGTAGAATCGTTGGGACATTGTAA 666 0.4189 MQVEDVGFLNQKGLDAYDSFGAYSQHGDHAIEAGQEAGGLNGQPELGRGLSLGHSPKQDSRDVAALGTFSNQRLLPSIARVGQECAPLESWQFDLTTIKAATNNFADENKIGRGGFGEVYKGILLDGRQIAVKRLSTSSNQDSQRHKLLSWFQRYNTIRGIARGIVYLHEQSRLKVIHRDLKPSNVLLDENMTPKISDFGLARIVEINQDQGSTSRIVGTL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00741 221 SMART serkin_6 105 218 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00741 221 ProSitePatterns Protein kinases ATP-binding region signature. 111 133 IPR017441 GO:0005524
Rops5g00741 221 Pfam Protein kinase domain 146 220 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00741 221 SUPERFAMILY Protein kinase-like (PK-like) 93 221 IPR011009 -
Rops5g00741 221 Gene3D Transferase(Phosphotransferase) domain 1 84 145 - -
Rops5g00741 221 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 87 144 - -
Rops5g00741 221 ProSiteProfiles Protein kinase domain profile. 1 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00741 221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Rops5g00741 221 Gene3D Transferase(Phosphotransferase) domain 1 146 221 - -
Rops5g00741 221 FunFam Os07g0541700 protein 137 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00741 Rops-Chr5 13437303 13442638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00741 77 220 Receptor kinase-like Gene Family AT4G23140 44.330 3.33e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g00741 Pkinase 1.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00741 - - lja:Lj0g3v0067799.1 204.527