Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00738 ATGGTTGATGATAAGGAACAGACTTATTTCCCATCATCCGATTCCTATAGCAGCAAGAGCAAAAAGAAATCTGCTTCTGGAGATAAGCAGCAAGATCACTATGCCTTATCGGGTCTGAGCAATCTAAGGCTGCTCTTCTTCTTGAGGAAAGCGGAAGGCTGCAAGGCGAGCAAAAAGGATGAAATAGAAAGTCACTTTAAGACAATTCAGGGAGTATATGAAGTGTTGATCGATCCTGTGAAGAGAAGAATTTATGATTCTATAGATGAGTTTGATGACGAGATTCCCACCGACTGTGCACCACAAGATTTCTTCAAGGTGTTTGGCCCTGCTTTTATGAGGAATGGCCGGTGGTCAGTTAATCAACCAATTCCACCACTAGGGGATGATAATACTCCATTAAAAGAAGTTGATAATTTCTACAATTTTTGGTATTCATTCAAAAGCTGGAGAGAGTTTCCCCATGCCGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGAACATAGGAGGTGGATGGAAAGGCAGAATGCAAAACTGACAGAGAAAGCCAGGAAAGAAGAGTATGGACGGATACGCAATCTTGTTGATAATGCTTATAAGAGAGACCCAAGTCACTGTTGA 624 0.4167 MVDDKEQTYFPSSDSYSSKSKKKSASGDKQQDHYALSGLSNLRLLFFLRKAEGCKASKKDEIESHFKTIQGVYEVLIDPVKRRIYDSIDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPPLGDDNTPLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESREHRRWMERQNAKLTEKARKEEYGRIRNLVDNAYKRDPSHC* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00738 207 ProSitePatterns Nt-dnaJ domain signature. 66 85 IPR018253 -
Rops5g00738 207 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 4 204 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Rops5g00738 207 Gene3D DnaJ domain 14 87 IPR036869 -
Rops5g00738 207 SUPERFAMILY Chaperone J-domain 60 113 IPR036869 -
Rops5g00738 207 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00738 Rops-Chr5 13225760 13226457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00738 48 203 C2H2 Transcription Factor Family AT1G74250 27.179 7.29e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00738 K09522 - gmx:100806665 335.495