Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00732 ATGGTTCGGATTGATGACAAAACTCCGCAACCCAGCCCAGTTGGTCAAGAATGTGCCCCTTTAGAGTCATGGCAGTTTGATTTGACTACAATTGAAGTAGCAACCAACAACTTTGCTGATGAGAATAAGATTGGCAGAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTTCTTGATGGACGACAAATAGCTGTAAAGAGATTGTCAACAAGTTCTAACCAAGGTGCTAATGAATTCAAGACCGAAATTTCATTGATAGCCAAGCTTCAACATAGAAACCTAGTGGCATTCATTGGTTTCTGTCTTGAAGAACAGGAGAAAATATTGATTTATGAATACATGCTGAACAAGAGCCTTGATTACTTTTTATTTGATTCTCAAAGGCACAAGTTGTTAAGCTGGTTTCAACGTTACAATATCATAGGAGGGATTGCCCAAGGAATTCTTTATTTACACGAACATTCGCGACTCAAAGTTATACATCGTGATCTCAAACCCAGTAATGTTCTGTTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGGTCTAGCTAGAATTGTTGAAATAAATCAAGACCAAGGAAGTACAAGTAGAATCGTTGGGACATTTGGCTATATGTCTCCAGAATATGCAATGTTTGGACAATTTTCTGAGAAATCAGATGTTTTCAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGGGAAAAAGAATCTAAGTTCTTATGAATCACATCGTGTTGTTGATGGCCTCTTGAGTTATGTTTGGAGACAATGGAGGGATGAAACACCAATAAGCACATTGGATCCAAATATTAAAGAAAATTATTCTGAAGTTGAATTTGACAACGCATCGCGTTTAGTGCCATTTTCTGGCGCTGAGCGCCACCCATACAGAACCAACAGCTCAAATTGCGCTAAGCGCATAAGAATCCGCGCTAAGCCCCACGACACCAGCAGCGACGTCAAAACTTTGAGGCTAAACGTCTGTTTTAGCTCTTTTCTATTTATGGGAAAGTTGTAG 1026 0.385 MVRIDDKTPQPSPVGQECAPLESWQFDLTTIEVATNNFADENKIGRGGFGEVYKGILLDGRQIAVKRLSTSSNQGANEFKTEISLIAKLQHRNLVAFIGFCLEEQEKILIYEYMLNKSLDYFLFDSQRHKLLSWFQRYNIIGGIAQGILYLHEHSRLKVIHRDLKPSNVLLDENMIPKISDFGLARIVEINQDQGSTSRIVGTFGYMSPEYAMFGQFSEKSDVFSFGVMVLEIITGKKNLSSYESHRVVDGLLSYVWRQWRDETPISTLDPNIKENYSEVEFDNASRLVPFSGAERHPYRTNSSNCAKRIRIRAKPHDTSSDVKTLRLNVCFSSFLFMGKL* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00732 341 Gene3D Transferase(Phosphotransferase) domain 1 114 325 - -
Rops5g00732 341 PIRSF ILK 21 255 - -
Rops5g00732 341 PIRSF ILK 280 335 - -
Rops5g00732 341 ProSitePatterns Protein kinases ATP-binding region signature. 44 66 IPR017441 GO:0005524
Rops5g00732 341 Pfam Protein kinase domain 39 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00732 341 ProSiteProfiles Protein kinase domain profile. 38 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00732 341 FunFam Lectin-domain containing receptor kinase A4.3 114 322 - -
Rops5g00732 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Rops5g00732 341 SUPERFAMILY Protein kinase-like (PK-like) 16 271 IPR011009 -
Rops5g00732 341 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 278 - -
Rops5g00732 341 SMART serkin_6 38 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00732 341 Gene3D Phosphorylase Kinase; domain 1 7 113 - -
Rops5g00732 341 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 4 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00732 Rops-Chr5 12933905 12944915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00732 17 289 Receptor kinase-like Gene Family AT4G11530 59.341 1.18e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g00732 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00732 - - gmx:100808174 445.662