Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00731 ATGAGAATAAGATTGGGTATTCTTCTTGATGGACGACCAATAGCGGTAAAGAGATTATCAAGAAGTTCTAAGCAAGGTGCTAATGAGTTCAAAAACGAAGTTTTATTGATTGCCAAGCTTCAACATAGAAACCTAGTGGCATTCATTGGCTTCTGTCTCGAAGAACAAGAGAAAATACTTATTTATGAATATGTGCCGAACAAGAGCCTTGATTACTTTTTATTTGGTTCTCGAAGGCAAAAGTTATTAAGTTGGTTTGAACGTTACAATATTATAGGAGGGATTGCTCGAGGAATTCTTTATTTACATGAGCTTTCTCGACTCAAAGTTATACATCGTGATCTCAAGCCCAGTAATATTTTGTTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGGTCTAGCTAGAATTGTCGAAATAAATCAAGACCAAGGAAATACAAACAGAATTGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGCTCGGACAATTTTCTGAAAAGTCAGATGTTTATAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGGAAAAAAGAATATAAGTTCTTATGAATCACATCGTGTTACTGATGGCCTTCTAAACTATGTGAGTATACCTAAATTGACTTAA 642 0.3364 MRIRLGILLDGRPIAVKRLSRSSKQGANEFKNEVLLIAKLQHRNLVAFIGFCLEEQEKILIYEYVPNKSLDYFLFGSRRQKLLSWFERYNIIGGIARGILYLHELSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEINQDQGNTNRIVGTYGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITGKKNISSYESHRVTDGLLNYVSIPKLT* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00731 213 SUPERFAMILY Protein kinase-like (PK-like) 4 200 IPR011009 -
Rops5g00731 213 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 197 - -
Rops5g00731 213 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00731 213 FunFam Uncharacterized protein 1 64 - -
Rops5g00731 213 Gene3D Phosphorylase Kinase; domain 1 2 64 - -
Rops5g00731 213 Gene3D Transferase(Phosphotransferase) domain 1 65 211 - -
Rops5g00731 213 SMART serkin_6 2 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00731 213 Pfam Protein kinase domain 10 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00731 213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Rops5g00731 213 FunFam Lectin-domain containing receptor kinase A4.3 65 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00731 Rops-Chr5 12870644 12871627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00731 6 209 Receptor kinase-like Gene Family AT4G23130 67.157 4.08e-95 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g00731 Pkinase 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00731 - - gmx:100804650 350.517