Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00728 ATGATGAAGCAGGTTATTCTTCTGTTCTGCTTTGTTTCTGGACTGACCCTTTCAGTCTCAGAGTCCAAATCTGCTTCTTTGCAACCTCATGCTTTGGAATCCTTTGATATTGGTTATATTAAGATGAAGACCGAGCATAACTGTTCTTATCTGGTGATGATAACTACAAGTTGTTCTTCACCCAAGTTTACATCGGATAAGATCAGTATTACATTTGGGGATGCTAAAGGAAACCAGGTATATGCACCAAGATTGGGCGATCCAATTTCAGGGACATTTGAGCAATGTTCCTCAGATTCATTTCAGTTAGATGGTGAATGTGCATCTCCAATATGTTATGTGTACATATATAGATCTGGTGCAGATTATGGTTGGAGGCCTGAAAGTGTGAAAATCTATAGCTACAACACTGATCCTATTACTTTTGAGTTTGGCACTTCCATCCCCAATGATACTTGGTATGGGTATAATTTCTGTGACACTCGTCCTCCTCCTCCTACTCCTCCTTCTTCTTCATACCAACTATCCACTGGGAAATGGCTTGTATTTTTGGTTCTAGGAGCTGTTCTTTGTTTTTTGATGTAA 585 0.3949 MMKQVILLFCFVSGLTLSVSESKSASLQPHALESFDIGYIKMKTEHNCSYLVMITTSCSSPKFTSDKISITFGDAKGNQVYAPRLGDPISGTFEQCSSDSFQLDGECASPICYVYIYRSGADYGWRPESVKIYSYNTDPITFEFGTSIPNDTWYGYNFCDTRPPPPTPPSSSYQLSTGKWLVFLVLGAVLCFLM* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00728 194 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 5 163 - -
Rops5g00728 194 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 46 156 IPR036392 GO:0005515
Rops5g00728 194 CDD PLAT 48 159 - -
Rops5g00728 194 Gene3D PLAT/LH2 domain 42 183 - -
Rops5g00728 194 Pfam Embryo-specific protein 3, (ATS3) 41 159 IPR010417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00728 Rops-Chr5 12827605 12829271 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00728 - - gmx:100305526 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02884 6 51455711 51459089 Rops5g00728 5 12827605 12829271 PCT