Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00725 ATGAACATGGCGAAGAACAAATGGGGTGCGTTTGGATTCTGGTTTTTCGTTCTCTCCATCGTGATCTCTTCTAGGGTTTGTTATTCTGCCAGATCCGACAAGGAAACCCGAGAAAGGTTCTATGGGAGCATGCTTAATTCGTCTTCACCTGAATCCAATGATGGGACCTTGGCTAAGATGTTCGATCGCGTTCTAGAGAAGGAGTTTTCAGAGAATGAAGATCAACCTGAAGGAGCTGATAAAAGCAGCTTCAATAGCAGTGTAGCTGATCAACAGGCTGTATTGGAGACTGTAGCGAAAATTACTCATCATGAGAAAGTAAAGAGAAATGACACGCATGAGGGAAATGGCACAAGATCATTTCAACTTCAAGATGTGTTCTCTCTAGAAAATGAAGATTCTGATGATGTGACAACTTTGATTGACAAAAAGGACAATGTCTTTGTGATGTCAAACAAGAAATCCAAATATCCTGTGCTTCAACTGGACTTAAGGCTAATATCAGATTTGGTGGTTGTCATCGTTTCTGCAGCCATTGGTGGAATTGTCTTTTCCTGTTTGGGGCAACCGGTTATTGTTGGCTATCTTCTTGCAGGCTCCCTTATTGGACCAGGGGGTTTGAAATTCATTAGTGAAATGGTACAGGTTGAGACTGTTGCACAATTTGGGGTAGTGTTTCTTCTCTTTGCTTTGGGGCTGGAGTTTTCCTTGGCCAAGTTAAAAGCTGTGGGGCCTGTTGCTGTTCTTGGAGGGTTGCTTCAAATTGCAGTATTCATGTTCCTTTGTGGCATTCTTGCCATGTTATTTGGAGGCAAATTGTCTGAGGGTGTTTTTGTTGGTTCCTTTCTGTCAATGTCATCAACAGCAGTGGTGGTAAAGTTTTTGGTGGAGCGGAATAGTAATAATGCTCCTCATGTTCAAGTTACAATTGGGACTCTTATTTTTCAGGATTGTGCAGTGGGTTTACTATTTGCTTTGCTCCCTGTTTTGGGTGGTAACAGTGGTCTTTTACAAGGAATAATGTCAATGGGAAAAGTGTTGCTAATGTTGTCCCTGTATCTCACTGCTACATCTGTATTGTCTTGGTCGTTTGTTCCTCGCTTTCTTAAACTGATGATGCGGCTCTCATCTCAGACAAATGAACTTTATCAGCTCGCTGCTGTTGCTTTCTGCTTGTTATCTGCATGGTGCAGTGATAAGCTTGGCCTTAGTCTTGAGCTGGGTTCATTTATGGCTGGTGTTATGATTTCTACAACAGACTTTAGTCAACATACTTTGGACCAGGTGGAACCAATTCGTAACCTATTTGCAGCTCTCTTCCTCTCGAGTATTGGAATGCTTATACATGTGCAATTCCTTTGGATCCACGTGGATATCTTGCTGGCATCTGTTATTCTGGTCGTAGTTGTTAAGACTGCTGTTGCTTCTATGGTTACAAAGGCCTTTGGGTATAGCCTTAAGACATCATTTATTGTTGGTATCTCACTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTGAGTCGTGCTTCAAATCTTCATCTTGTTGAGGGGAAAATGTATCTTCTTCTTCTAGGGACAACGGCTCTCAGTCTGGTTACAACACCACTTTTGTTTAAATTGATACCTGCTGTCATGAATCTGGGTGTTCTCATGCACTGGTTCCCCGCTGAAAGTAGCCCACAAACTGAGGGGAAAGCTTTGATGACTGAAGCAAACAGAATGTTGTGA 1731 0.4217 MNMAKNKWGAFGFWFFVLSIVISSRVCYSARSDKETRERFYGSMLNSSSPESNDGTLAKMFDRVLEKEFSENEDQPEGADKSSFNSSVADQQAVLETVAKITHHEKVKRNDTHEGNGTRSFQLQDVFSLENEDSDDVTTLIDKKDNVFVMSNKKSKYPVLQLDLRLISDLVVVIVSAAIGGIVFSCLGQPVIVGYLLAGSLIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLAKLKAVGPVAVLGGLLQIAVFMFLCGILAMLFGGKLSEGVFVGSFLSMSSTAVVVKFLVERNSNNAPHVQVTIGTLIFQDCAVGLLFALLPVLGGNSGLLQGIMSMGKVLLMLSLYLTATSVLSWSFVPRFLKLMMRLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFMAGVMISTTDFSQHTLDQVEPIRNLFAALFLSSIGMLIHVQFLWIHVDILLASVILVVVVKTAVASMVTKAFGYSLKTSFIVGISLAQIGEFAFVLLSRASNLHLVEGKMYLLLLGTTALSLVTTPLLFKLIPAVMNLGVLMHWFPAESSPQTEGKALMTEANRML* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00725 576 Gene3D - 164 547 IPR038770 -
Rops5g00725 576 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 569 IPR045158 GO:0015386|GO:0071805|GO:1902600
Rops5g00725 576 Pfam Sodium/hydrogen exchanger family 171 540 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00725 Rops-Chr5 12793705 12805814 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00725 30 574 Antiporters AT5G51710 81.136 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00725 K26735 - gmx:100810302 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00725 5 12793705 12805814 Rops5g00725 5 12793705 12805814 ECH