Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00718 ATGAGAAAGCATTGTCAATGGGTTACTTTGGATGCGTTAAATTGTTCCCTAAATCCTTTCTGTGAGGATCAAGCTGCTGTTGATTCAGGCAGAACTCAAGCTGTGGGCATTGGTTGCATTTTTCATCATTTCAGGTCAAATTTTGGTTCTCGAAGGCAAAAGTTATTAAGTTGGTTTGAACGTTACAATATCATAGGAGGGATTGCTCGAGGAATTCTTTATTTACATGAGCATTCTCGACTCAAAGTTATACATCGTGACCTCAAGCCCAGTAATATTTTGTTAGATGAAAATATGATTCCAAAAATTTCAGATTTCGGTCTAGCTAGAATTGTCGAAATAAATCAAGACCAAGGAAATACAAACAGAATTGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGCTCGGACAATTTTCTGAAAAGTCAGATGTTTATAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGAAAAAAAGAATATAAGTTCTTATGAATCACACCGTGTTACTGATGGCCTTCTAAATTATGTGAGTATAATAGTCTAG 555 0.3514 MRKHCQWVTLDALNCSLNPFCEDQAAVDSGRTQAVGIGCIFHHFRSNFGSRRQKLLSWFERYNIIGGIARGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEINQDQGNTNRIVGTYGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITEKKNISSYESHRVTDGLLNYVSIIV* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00718 184 ProSiteProfiles Protein kinase domain profile. 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00718 184 SUPERFAMILY Protein kinase-like (PK-like) 38 170 IPR011009 -
Rops5g00718 184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
Rops5g00718 184 SMART serkin_6 3 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00718 184 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 39 171 - -
Rops5g00718 184 Pfam Protein kinase domain 52 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00718 184 FunFam Os07g0541700 protein 45 127 - -
Rops5g00718 184 Gene3D Transferase(Phosphotransferase) domain 1 41 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00718 Rops-Chr5 12744514 12752441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00718 48 183 Receptor kinase-like Gene Family AT4G23130 66.176 6.91e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g00718 Pkinase 3.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00718 - - gmx:100806048 234.958