Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00715 ATGAAGAAGGAGACAAGAAAAAAAGATGGTCAATTGCGACGAATCATCTTAATTGTTGTGCCTTCAATTGCTTTCGCGATGCTTTTCTCATTTGGCTACTATGGGTTAAGGAGAAAAGCAAGAAAAAGTTACAAGACTATGCTTAAGGAAAATTTTGGTCAAGAATGTGCCAGTTTAGAGCCATTGAAGTTTGATTTGACAGTAATTGAAGAAGCAACCAACAACTTTGCAGACGAGAATAAGATTGGTAAAGGCGGTTTTGGAGTAGTTTACAAGGGTATTCTTCTTGATGGACGACCAATAGCTGTAAAGAGATTATCAAGAAGTTCTAAGCAAGGTGCTAATGAGTTCAAAAACGAAGTTTTATTGATTGCCAAGCTTCAACATAGAAATCTAGTGGCATTCATTGGCTTCTGTCTTGAAGAACAAGAGAAAATACTTATTTATGAATATGTGCCGAACAAGAGCCTTGATTACTTTTTATTTGGTTCTCGAAGGCAAAAGTTATTAAGTTGGTTTGAACGTTACAATATTATAGGAGGGATTGCTAGAGGAATTCTTTATTTACATGAGCTTTCTCGACTCAAAGTTATACATCGTGATCTCAAGCCCAGTAATATTTTGTTAGATGAAAATATGATTCCAAAAATTTCAGATTTTGGTCTAGCTAGAATTGTCGAAATAAATCAAGACCAAGGAATTACAAACAGAATTGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGCTCGGACAATTTTCTGAAAAGTCAGATGTTTATAGTTTTGGAGTCATGGTTTTAGAGATTATTACTGGAAAAAAGAATATAAGTTCTTATGAATCACACCGTGTTACTGATGGCCTTCTAAACTATGTGTCGAAATGA 891 0.3468 MKKETRKKDGQLRRIILIVVPSIAFAMLFSFGYYGLRRKARKSYKTMLKENFGQECASLEPLKFDLTVIEEATNNFADENKIGKGGFGVVYKGILLDGRPIAVKRLSRSSKQGANEFKNEVLLIAKLQHRNLVAFIGFCLEEQEKILIYEYVPNKSLDYFLFGSRRQKLLSWFERYNIIGGIARGILYLHELSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEINQDQGITNRIVGTYGYMSPEYAMLGQFSEKSDVYSFGVMVLEIITGKKNISSYESHRVTDGLLNYVSK* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00715 296 SUPERFAMILY Protein kinase-like (PK-like) 57 284 IPR011009 -
Rops5g00715 296 FunFam Lectin-domain containing receptor kinase A4.3 152 296 - -
Rops5g00715 296 Gene3D Phosphorylase Kinase; domain 1 37 151 - -
Rops5g00715 296 Gene3D Transferase(Phosphotransferase) domain 1 152 296 - -
Rops5g00715 296 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 37 151 - -
Rops5g00715 296 SMART serkin_6 76 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00715 296 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Rops5g00715 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Rops5g00715 296 Pfam Protein kinase domain 77 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00715 296 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 293 - -
Rops5g00715 296 ProSiteProfiles Protein kinase domain profile. 76 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00715 Rops-Chr5 12638005 12646490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00715 31 295 Receptor kinase-like Gene Family AT4G23130 60.755 1.17e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops5g00715 Pkinase 9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00715 - - gmx:100806048 459.529