Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00712 ATGGATCCATCACTTTGTGCTAATGGTTGTGGTTTCTATGGTTCTGCTGAAAACAACAACCTTTGTTCAAAGTGTTACCAAGATTATCTCAAAGAAAACATTATTAAATCATATGATAAAGGTCTGAAGATTGAAACCAAGAACTTAAAGGATGAAACTTTGGTTCTTGAATCATCTACTTCTCCTAAACCATGTGCTTCAAACAATTCTATTAATGAACTTTGTGTTGCTATGACCGATGTTTCTCCCACTGAATTAGGGAACATGGAGAAGAAGAAAAAGAGGTGCAAGAACTGCAACAAAAAGGTTGGATTATTAGGGTTCAAGTGTCGTTGTGGGGATGTATTTTGTGGAAGGCATAGATACCCAGAAGAGCATGCATGCAAAGTGAATTTAAAGGAGATTGGGCGCCAAGCTTTGGCTAAACAAAATCCTATAATTAACAGTGATAAGTTAGAAGCTAGGATATGA 471 0.3652 MDPSLCANGCGFYGSAENNNLCSKCYQDYLKENIIKSYDKGLKIETKNLKDETLVLESSTSPKPCASNNSINELCVAMTDVSPTELGNMEKKKKRCKNCNKKVGLLGFKCRCGDVFCGRHRYPEEHACKVNLKEIGRQALAKQNPIINSDKLEARI* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00712 156 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 153 - -
Rops5g00712 156 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Rops5g00712 156 FunFam Zinc finger AN1-type containing 6 71 151 - -
Rops5g00712 156 Pfam AN1-like Zinc finger 96 129 IPR000058 GO:0008270
Rops5g00712 156 SMART AN1_Zf_4 96 133 IPR000058 GO:0008270
Rops5g00712 156 SUPERFAMILY AN1-like Zinc finger 84 150 IPR035896 -
Rops5g00712 156 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 46 - -
Rops5g00712 156 Gene3D - 1 48 - -
Rops5g00712 156 ProSiteProfiles Zinc finger AN1-type profile. 90 136 IPR000058 GO:0008270
Rops5g00712 156 Gene3D - 67 151 IPR035896 -
Rops5g00712 156 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Rops5g00712 156 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00712 Rops-Chr5 12531135 12531605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00712 5 153 C2H2 Transcription Factor Family AT3G52800 38.312 5.89e-27 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00712 - - gmx:102666624 191.815