Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops5g00702 | ATGGAGGAAAGAGAGATTTTTAGTTCTGGGGATGCTGTTAAGGTTAACGAGGCCCCAGAGAGCTTTCACGTGGCTCTAAATTCTGTGCAGTTTACGGGGCCCACAGCGGAGTCTCCGGCACCGGCTCCAGCTCCGGTGAATGCGCCGGCGGTGACTACCGGTAGTACGGAGGGAAAGAAGAAAAGGGGTAGGCCTAGGAAGTATGGACCGGACGGCAAGGTGGCGCTGTCGCCGATGCCGATATCGTCGTCGATTCCTTTGACCGGAGATTTCTCAGGCTGGAAAAAGGGTAGAGGGAAGCCTGTTGAACCAATCAAGAAGTCTTATAAGTTTTATGATTTTGAAGGTGGAGCAGGACCAGGTGATGGAATTGCATACTCAGTTGGTTCCAATTTCACTGCTCACGTGCTTACAGTAAATGGTGGCGAGGATGTTACTATGAAGATTATGTCTTTCTCTCAACAAGGATGCCATGCGATATGCATTCTCTCTGCAAATGGCACAATTTCAAATGTTACCCTTCGTCAACCGACTTCTTGTGGTGGTACTTCGACATATGAGGGAAGGTTTGAGATTCTTTCCTTGTGTGGTTCCTTTATGCCAACTGATAATGGATTTACAAGGAGTAGATCGGGTGGAATGAGCGTCTCTTTGGCAGGTCCAGATGGTCGAGTTATGGGGGGTGGACTGGCTGGTTTGCTCGTAGCTGCAGGTCCAGTGCAGGTTGTGGTAGGCAGTTTTCTTCCTGGTCACCAGCTGGAGCATAAATCCAAGAAGCAAAGGGTAGAGCATACATCACCAATTGTCCCTACTTCACATGTTAATCCTATTCCTGCTGAAGAAATACAAATCAGTCTTGGTGGAGTAAGGCCCATCATGACACCTGCTGGTTTTCAAGTGGACAACAACATTGCTCCTTTCAACAATGGTCAAGGCCCTAGGAACTCATCTGCTAATGATGAGGCCCCTTTATTTGAAAAGGAGTCTAACCCCACCAACCAATCAGATGCTGGAGTTGCATGCTAA | 1026 | 0.4825 | MEEREIFSSGDAVKVNEAPESFHVALNSVQFTGPTAESPAPAPAPVNAPAVTTGSTEGKKKRGRPRKYGPDGKVALSPMPISSSIPLTGDFSGWKKGRGKPVEPIKKSYKFYDFEGGAGPGDGIAYSVGSNFTAHVLTVNGGEDVTMKIMSFSQQGCHAICILSANGTISNVTLRQPTSCGGTSTYEGRFEILSLCGSFMPTDNGFTRSRSGGMSVSLAGPDGRVMGGGLAGLLVAAGPVQVVVGSFLPGHQLEHKSKKQRVEHTSPIVPTSHVNPIPAEEIQISLGGVRPIMTPAGFQVDNNIAPFNNGQGPRNSSANDEAPLFEKESNPTNQSDAGVAC* | 342 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops5g00702 | 341 | MobiDBLite | consensus disorder prediction | 32 | 72 | - | - | |
Rops5g00702 | 341 | ProSiteProfiles | PPC domain profile profile. | 129 | 271 | IPR005175 | - | |
Rops5g00702 | 341 | MobiDBLite | consensus disorder prediction | 254 | 274 | - | - | |
Rops5g00702 | 341 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 34 | 309 | IPR039605 | GO:0003680 | |
Rops5g00702 | 341 | Gene3D | - | 133 | 265 | - | - | |
Rops5g00702 | 341 | CDD | DUF296 | 135 | 247 | IPR005175 | - | |
Rops5g00702 | 341 | MobiDBLite | consensus disorder prediction | 303 | 341 | - | - | |
Rops5g00702 | 341 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 134 | 247 | IPR005175 | - | |
Rops5g00702 | 341 | FunFam | AT-hook motif nuclear-localized protein 1-like | 134 | 265 | - | - | |
Rops5g00702 | 341 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 130 | 250 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops5g00702 | Rops-Chr5 | 12392631 | 12399257 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops5g00702 | 52 | 316 | AT-hook Motif Nuclear Localized (AHL) Family | AT5G62260 | 51.282 | 7.13e-87 | 265 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops5g00702 | - | - | gmx:102667678 | 459.529 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops5g00702 | 5 | 12392631 | 12399257 | Rops6g01570 | 6 | 32675152 | 32680958 | ECH | |
Rops5g00702 | 5 | 12392631 | 12399257 | Rops5g00702 | 5 | 12392631 | 12399257 | ECH | |
Rops5g00702 | 5 | 12392631 | 12399257 | Rops6g01570 | 6 | 32675152 | 32680958 | PCT |