Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00691 ATGGAGTGTTCAGTACTTGTTCTTATCTTCTCTCTCATGGTTTTACTCTTGAACCCAACATGGGTTTGTGGGAATGATGAGCTTAGAGCACTCTTGGACTTGAAAGCCACTTTGGATCCAGAAGGGCATTTTCTGTCCTCATGGAATATGAATGACAACCTATGTTCTTTTGAAGGGGTGGCTTGTAATGAGAAGGGTCAAGTGGCAAATGTTTCTTTGCAAGGAAAAGGTCTCTATGGGAAGCTATCACCAGCCATCGGTAGGCTCAAGCACTTGACCGGACTCTACTTGCATTACAACTCTTTGTATGGAGAGATACCAAGAGAAATTGCTAACTTGACTGAGCTTAGTGATTTGTACTTGAATGTCAATCATTTGTCTGGTGAAATCCCTCCTGAGATTGGCAAGATGGAGAACCTCCAAGTTTTGCAGCTTTGTTATAATCAGTTAACAGGAAGCATACCTTCAAAGCTTGGTTATTTGAAAAAGCTCAGTGTTCTTGCTTTGCAATCAAACCAGTTATCTGGAGCTATCCCTGCTAGTCTAGGTGATTTGGGAATGTTGATGAGGCTAGATTTGAGCTCTAATAATCTCTTTGGTTCCATTCCCAATAGACTAGCTGATGTTCCTTCACTACATGTTGTGGATGTTCACAACAATACTCTCTCTGGGAATGTACCCCCTGCTCTGAAGAGACTAGAAGATGGATTTGTGTATGAAAATAATTTGGGGTTATGTGGACTTGGGTTTTCATCCTTGAAAGCTTGCAATGCTTCAGATCATGTCAATTCCAACAGACCTAAACCTTATGGAGCAGGAGTTTCTGGTCTGTCAAGGGATATCCCGGAAACTGCAAATATAAATTTGCCTTGCAATACAACTCAATGCCAAAATTCATCAAAATCCAAAAGAACAACATCTATTACTGTTGGCATTATTCTGGTTATGATTGCAATATCGGCTATTGGTATTCTGACCTTCACCATTTATCGTCGGCGGAAGCAAAAGCTTGGAAGTGCATTTGATATCACTGAAAGCCGTCTAAGTACTGATCAAGCCAAGGGTATATACAGGAAAAATGGATCTCCTTTGGTCAGCCTTGAGTATGCTAATGGATGGGACCCTTTGGCTGATAGCAGGAATTTTAATGGGGATAGGCAAGATATGTTCCAGAGTTTCAGGTTCAACTTGGAAGAAGTGGAGTCAGCTACTCAGTATTTCTCTGAGTTGAATTTGTTGGGTAAGAGTAACTTTAGTGCAACATATAAAGGAGTTTTAAGAGATGGTTCTCTTGTTGCTGTTAAGAGCATCAGTAAAACTAGTTGCAAATCGGATGAAGCTGAATTTTTGAAGGGGTTGAACATCTTGATGTCGTTAAGGAATGAGAATTTGGTGAGGTTGAGAGGATTTTGTTGTTCAAGGGGACGAGGTGAATGCTTCTTGATTTATGATTTTGTTGCTAATGGAAATCTGTCAAGCTACCTTGATGTGAAGGAAGGTGATGGACAAGTTCTTGAATGGTCAACTAGAGTCTCTATAGTGAAAGGGATTGCCAAAGGTATTGCATATTTACATACATACAAAGCCAACAAACCCTCTCTTGTTCACCAAAACATCTCAGCTGAGAAAGTGCTCATTGATCAGCGCCACAACCCATTGCTTTCAGATTCTGGCCTCTACAAGCTTCTCACCAATGACATTGTCTTCTCTGAATTAAAGGGCAGTGCAGCAAAGGGTTACCTAGCTCCGGAATACACCACTACCGGCCGGTTCACAGAGAAAAGTGATGTATATGCTTTCGGGGTGCTTCTTTTCCAGATCCTTACAGGGAAGCATAAGATCACTAGCTCAATGCGCCTTGCTGCAGAATCCTTAAGATTGCAAGAACTTATCGACCTGAATCTCCATGGCAGGTTCTTTGAATACGAGGCGGCTAAGCTAGCAAGAATGGCTTTAATTTGCTCACATGACAATCCCTTTGAGAGACCATCCGTGGAAGCCATTGTGCAAGAACTTAATAATTGTAGTAGCAGTGTTTGA 2040 0.4142 MECSVLVLIFSLMVLLLNPTWVCGNDELRALLDLKATLDPEGHFLSSWNMNDNLCSFEGVACNEKGQVANVSLQGKGLYGKLSPAIGRLKHLTGLYLHYNSLYGEIPREIANLTELSDLYLNVNHLSGEIPPEIGKMENLQVLQLCYNQLTGSIPSKLGYLKKLSVLALQSNQLSGAIPASLGDLGMLMRLDLSSNNLFGSIPNRLADVPSLHVVDVHNNTLSGNVPPALKRLEDGFVYENNLGLCGLGFSSLKACNASDHVNSNRPKPYGAGVSGLSRDIPETANINLPCNTTQCQNSSKSKRTTSITVGIILVMIAISAIGILTFTIYRRRKQKLGSAFDITESRLSTDQAKGIYRKNGSPLVSLEYANGWDPLADSRNFNGDRQDMFQSFRFNLEEVESATQYFSELNLLGKSNFSATYKGVLRDGSLVAVKSISKTSCKSDEAEFLKGLNILMSLRNENLVRLRGFCCSRGRGECFLIYDFVANGNLSSYLDVKEGDGQVLEWSTRVSIVKGIAKGIAYLHTYKANKPSLVHQNISAEKVLIDQRHNPLLSDSGLYKLLTNDIVFSELKGSAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILTGKHKITSSMRLAAESLRLQELIDLNLHGRFFEYEAAKLARMALICSHDNPFERPSVEAIVQELNNCSSSV* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00691 679 Gene3D Ribonuclease Inhibitor 24 172 IPR032675 -
Rops5g00691 679 FunFam Protein NSP-INTERACTING KINASE 2 135 257 - -
Rops5g00691 679 SUPERFAMILY L domain-like 23 232 - -
Rops5g00691 679 Gene3D Ribonuclease Inhibitor 173 242 IPR032675 -
Rops5g00691 679 CDD TM_EGFR-like 304 336 - -
Rops5g00691 679 ProSiteProfiles Protein kinase domain profile. 407 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00691 679 SUPERFAMILY Protein kinase-like (PK-like) 385 673 IPR011009 -
Rops5g00691 679 Pfam Protein tyrosine and serine/threonine kinase 411 672 IPR001245 GO:0004672|GO:0006468
Rops5g00691 679 Gene3D Transferase(Phosphotransferase) domain 1 486 679 - -
Rops5g00691 679 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 75 674 - -
Rops5g00691 679 FunFam Protein NSP-INTERACTING KINASE 2 378 485 - -
Rops5g00691 679 FunFam Protein NSP-INTERACTING KINASE 2 486 676 - -
Rops5g00691 679 Gene3D Phosphorylase Kinase; domain 1 378 485 - -
Rops5g00691 679 FunFam Leucine-rich repeat receptor-like kinase 26 132 - -
Rops5g00691 679 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00691 Rops-Chr5 12244898 12248866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00691 3 520 Miscellaneous Gene Families AT4G22730 55.179 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Rops5g00691 PK_Tyr_Ser-Thr 8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00691 - - gmx:100789253 1164.06