Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00682 ATGGAGTGCAATAAGGATGAGGCCACCAGAGCTAAAGAAATCGCTGAGAAGAAGTTTATTGCAAAGGACACTTTGGGTGCAAAGAAGTTTGCTCTGAAAGCGCAAAATTTATTTCCTGCCCTTGAGGGTATCCCTCAAATGATAGCAACACTCGACGTGTATGTTTCTGCTGAGAATAAAATAAATGGAGAAGCAGATTGGTATGGTATACTTGGTGTGGACCCCCTTGCCGATGATGATACAGTCAGAAAACAATACAGGAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTTATTTCAGAGGCATGGAGTTTACTATCAGACAAGACTAAAAGGGCAGCTTATGATGGGAAGAGAAATGCAAAGGCACGGAAAGGTTCAACTATATTTGGTGGTTCATCAGCAAAAACAGGGGCTAATGGCAGTTACAATTTTACCAAGACTACCCCTTCAAGCACAAAGACTCAGAAGAATACCGCTAAAGGACACGCTTCATCGTCTACCAATAAATCAAAACCTACATTTTGGACTGCTTGCAATCGATGCAAAATGCAGTATGAGTATCTCAGAGTTTATCTTAACCTTAAACTTTTGTGTCCCAACTGCCATGAGGCATTTTTTGCTGTTGAAACCGATCCACCTCCTGCAAGTGGTATTAGACCTGCAACTTCATGGAACTTTTCACAGAATCAGCAGAAGTTCAATCACCAAGTACCTAATAAAAGCAAATCTAATGCCGGAAAGAACAATACGGCAGCCCCAAATGATGGAGCAGGGTCTCATAGTAAAACTGAATCTTATAACAAAACCAGTTTCCAGTGGACTCCATTCTCAAAAACTTCTGGTGTTTCTAACGTGGCTCAAGCTGCAAGCGTGGTTCAGCAGGCATATGATAAGGTGAAGCGAGATCGTGAGGAGGCACAAGCAGCTACCAAAAGGGAAGAGGCCTTAAAAAGGAAGCAGCATGCTTCTAGAAAAAAATACTTTAATCCAGCTAAGAGAAAAAGGGGGGCCACGGAGGATGCAAGTGCGAGTAACCATGGTAAGGAACCTGTAAACTCGTGCACATCTAAACAGGGTAATTTTGAATATAATGGGGTAAGTAGAATCAATAAGACCAGCTGTGCAAGAGATTTCTCCCGGGCTGAACTTCAGAATCTTCTTACAGAGAAAGCTAGAAAAGAAATTAGCAAGAAACTCAGGGAAATTCAGTCAAATACTGTTGATAAATCAGTGGTGAAAGAGAGTGGAAATGGCTTCCAGAGAGCAAATGAGAAAGGAGAAAAATCTTTAAGTAACCCTGAGACGTGTGCTCAAAATAACACCGGGAAGTCAGAAGATGGAAAGAGTGGTTTGCAAGGAATCAAGTCATTTGCGGGTACTACCATTGATAAAATTGGCACAAAAATTTTAGATACAATGCCAGTAGATGTTCCAGATCCTGATTTCCATGATTTTTACAAGGATCGAACTGAAAGATCTTTTGGTGAAAATCAAGTATGGGCTGCATATGACGATGATGATGGGATGCCCCGATATTATGCAATGATCCACACTGTGATCTCTCTGAATCCATTCAAGATGCAGATCAGTTGGCTCAACCCAATTAACAACAGTGAACTGGGCCCCCTAAATTGGGTTGCTTTAGGCTTTTCAAAAACTTGTGGGGATTTTAGAATAGGCAGACATGAAATCTATGACTCGATCAGTTTTTTCTCTCACAAGGTTAGGTGGAGAAAAGGTAATGATGGAGCCATTTGTATATATCCCAGAAAAGGGGATGTTTGGGCCATCTATAGGAATTGGTCTCCTGACTGGAATGAGCTGACAGAAGATGAGGTTATACACAAGTTTGATATGGTTGAAGTACTTGAGGATTTTAATGAAGAACATGGTGTAACTGTTATTCCTCTGGTCAAGGTGGCAGGGTTCAAGACAGTATTTCACCAACACCTAGATTCAAGAGAAGTCAGGATCATTCCGAGGGAAGAAATGTTTCAGTTCTCTCATCTGGTACCTTCACATTTACTTACTGGTCAAGAAGCTCTGAATGCTCCAAAGGGTTGCAGGGTGTTGGACCCTGCTGCTACTCCATCTGACCTTCTTCAGGTAATAAAAGTTGTGGAGGATGAAGACATGGTGGACAATGGGGATAGTGTTAAAATTATAAAAGAAACAAGTGATAGAATGAAAGAAGCTAAATGTGAGGAAATGATCATTGATATGGGAAAACTTGGGGAAGAAAAGGAGGGAAAGAATAAAGATATCCGGGAAATAGAAACTTTGAAAGAAGATAGGGGGAAGAAGATATGCACAACCTTGTAG 2358 0.4131 MECNKDEATRAKEIAEKKFIAKDTLGAKKFALKAQNLFPALEGIPQMIATLDVYVSAENKINGEADWYGILGVDPLADDDTVRKQYRKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKTKRAAYDGKRNAKARKGSTIFGGSSAKTGANGSYNFTKTTPSSTKTQKNTAKGHASSSTNKSKPTFWTACNRCKMQYEYLRVYLNLKLLCPNCHEAFFAVETDPPPASGIRPATSWNFSQNQQKFNHQVPNKSKSNAGKNNTAAPNDGAGSHSKTESYNKTSFQWTPFSKTSGVSNVAQAASVVQQAYDKVKRDREEAQAATKREEALKRKQHASRKKYFNPAKRKRGATEDASASNHGKEPVNSCTSKQGNFEYNGVSRINKTSCARDFSRAELQNLLTEKARKEISKKLREIQSNTVDKSVVKESGNGFQRANEKGEKSLSNPETCAQNNTGKSEDGKSGLQGIKSFAGTTIDKIGTKILDTMPVDVPDPDFHDFYKDRTERSFGENQVWAAYDDDDGMPRYYAMIHTVISLNPFKMQISWLNPINNSELGPLNWVALGFSKTCGDFRIGRHEIYDSISFFSHKVRWRKGNDGAICIYPRKGDVWAIYRNWSPDWNELTEDEVIHKFDMVEVLEDFNEEHGVTVIPLVKVAGFKTVFHQHLDSREVRIIPREEMFQFSHLVPSHLLTGQEALNAPKGCRVLDPAATPSDLLQVIKVVEDEDMVDNGDSVKIIKETSDRMKEAKCEEMIIDMGKLGEEKEGKNKDIREIETLKEDRGKKICTTL* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00682 785 MobiDBLite consensus disorder prediction 152 182 - -
Rops5g00682 785 Pfam DnaJ domain 66 127 IPR001623 -
Rops5g00682 785 MobiDBLite consensus disorder prediction 357 372 - -
Rops5g00682 785 MobiDBLite consensus disorder prediction 426 459 - -
Rops5g00682 785 MobiDBLite consensus disorder prediction 245 278 - -
Rops5g00682 785 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Rops5g00682 785 PANTHER BNAC03G44070D PROTEIN 1 709 - -
Rops5g00682 785 SMART dnaj_3 65 122 IPR001623 -
Rops5g00682 785 Pfam Domain of unknown function (DUF3444) 486 692 IPR024593 -
Rops5g00682 785 MobiDBLite consensus disorder prediction 426 463 - -
Rops5g00682 785 MobiDBLite consensus disorder prediction 314 329 - -
Rops5g00682 785 PRINTS DnaJ domain signature 102 122 IPR001623 -
Rops5g00682 785 PRINTS DnaJ domain signature 86 101 IPR001623 -
Rops5g00682 785 PRINTS DnaJ domain signature 68 86 IPR001623 -
Rops5g00682 785 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Rops5g00682 785 CDD DnaJ 66 119 IPR001623 -
Rops5g00682 785 Gene3D DnaJ domain 63 181 IPR036869 -
Rops5g00682 785 MobiDBLite consensus disorder prediction 314 372 - -
Rops5g00682 785 SUPERFAMILY Chaperone J-domain 59 126 IPR036869 -
Rops5g00682 785 Coils Coil 304 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00682 Rops-Chr5 12134135 12139453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00682 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.462 3.58e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00682 - - lja:Lj2g3v0520120.1 1121.3