Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00612 ATGATTGGTTCCAAAACCCATGCCAAGTTGCTTTCTGCAATTTTATCCATCATCATGAGCTTGGTCTTTAACATAAGCTTTTGCTATGTGGTCTTATTGTTTTTATTATTGAAAATGGTCTCGTGTCAAGAAATTCAGGAATTTTATCCAGAAGAAAGGGATGGTTTATTGCTTATAAGGGATTCTTTAAGTTCTTCTGTTGATTTGCATGGGAATTGGACGGGCCCTCCTTGTATAGAGAATCTTAGTAGATGGTTTGGTATCACTTGTTCCAATTGGCATGTTGTTCATATTGTACTTGAAGGTGTTAACCTTAGTGGCTATCTACCTTCTACATTCCTACAAAACATAACTTTCTTGAAGCAACTTAACTTCAGAAACAACTCACTTTTTGGGCCATTACCAAACCTCACAAGTTTGGTGTTTTTGGATCAAGTATTGTTCTCATTTAATCATTTCTCAGGGCCAATTCCTGTGGAGTATGTTGAACTGCCAAGTCTTCAAGTGTTGGAGCTTCAAGAAAACTACTTAGGTAGTGAAATTCCACCCTTTGATCAACCATCATTGACAAGTTTCAATGTGTCAAACAATCATCTGGTAGGGCCTATTCCTGAAACTTCTGTGCTCCAAAGGTTCCCAAAGAGTTCCTTTGATAATAATTCAGATCTTTGTGGAAAGCCATTGGATAAGTTATGTCCTGTTGAACCTCCTGCACCATCTCCATCTCCATTTCCTGCACCATCTCCAGTTATTCCTCCAAGTCCTGCTGAGGAAAAAAATAAGAAGAGACTTCAAGTGTGGATTATTGCTTTGATTGCTATTGCAGCAGCATTATTTCTTTTTCTGATCATTGTTGCTTTCTTGTGTTGTAAAAGACAAGCAAGTAGAAAAGAAACAAGAAAAAATGATCCAGCAGGGTATGTTTTTGGAGCATGGGCAAAGAAGATGGTGTCTGATACAGGGAACAGTGAAGATTCTCAAAGATTAGGCCGATTGGAATTTTCCAACAAGAAATTGGCAGTTTTTGACATGGATGATTTATTAAGGGCATCAGCAGAAGTGCTAGGAAGAGGGAATTTAGGTGTTACATACAAAGCAACACTTGAAACTGGTACTGTTGTTGCAGTAAAGAGACTTAGCTACATGAATGATTTGAGCAAGAAGGAATTCCTCCAGCAGGTACAATTGCTAGGACAAGTGAAGCATGAAAATCTAGTAGAAATTATATCCTATTATTATTCACAGGAGCAAAAGCTGATCATATATGAACTTATCAATGATGGCACTTTGTTTGAGCTCCTACATGAGGGTAGAGGATTTGGAAGAATTCCTCTTGATTGGACCACAAGATTGGCTATTATCAAAGACATAGCAAAGGGTCTTGCTTTTCTTCATCATTCTTTGCCTTCTCACAAGGTCCCTCATGCCAACCTCAAATCATCCAATGTACTAATCCATCAAGATAGCAAAGGTTACCATTCCAAGCTCACAGACCATGGCTTCTTGCCTCTACTCCCAGCTAAATGCAATGCAGAAAAGCTAGCCATAAGCAAGTCACCAGAATTTGTGAAAGGGAAGAAGCTGACACACAAAACTGATGTCTATTGCTTTGGTATCATTATGCTAGAGATTATAACTGGCAAAATTCCTGGTCAAATGTTAGGAGAAGTTGAAGAAACAAACAATGATCTTTCAGAGTGGGTAAGAACAGTGGTGAACAATGATTGGTCCACAGATATATTGGATTTAGAAATACTAGCAGAAAGAGAAGGGCATGATGCAATGCTGAAGCTAACAGAGTTGGCTCTTGAGTGTACAGATATGACACCAGAGAAGAGGCCTAAAATGAGTGTAGTATTGAGGAGAATGGAAGAAATAGAGCAAATGAAAATAGAGAATGAACAAATTGAAGTAAATATAGCATGA 1926 0.3827 MIGSKTHAKLLSAILSIIMSLVFNISFCYVVLLFLLLKMVSCQEIQEFYPEERDGLLLIRDSLSSSVDLHGNWTGPPCIENLSRWFGITCSNWHVVHIVLEGVNLSGYLPSTFLQNITFLKQLNFRNNSLFGPLPNLTSLVFLDQVLFSFNHFSGPIPVEYVELPSLQVLELQENYLGSEIPPFDQPSLTSFNVSNNHLVGPIPETSVLQRFPKSSFDNNSDLCGKPLDKLCPVEPPAPSPSPFPAPSPVIPPSPAEEKNKKRLQVWIIALIAIAAALFLFLIIVAFLCCKRQASRKETRKNDPAGYVFGAWAKKMVSDTGNSEDSQRLGRLEFSNKKLAVFDMDDLLRASAEVLGRGNLGVTYKATLETGTVVAVKRLSYMNDLSKKEFLQQVQLLGQVKHENLVEIISYYYSQEQKLIIYELINDGTLFELLHEGRGFGRIPLDWTTRLAIIKDIAKGLAFLHHSLPSHKVPHANLKSSNVLIHQDSKGYHSKLTDHGFLPLLPAKCNAEKLAISKSPEFVKGKKLTHKTDVYCFGIIMLEIITGKIPGQMLGEVEETNNDLSEWVRTVVNNDWSTDILDLEILAEREGHDAMLKLTELALECTDMTPEKRPKMSVVLRRMEEIEQMKIENEQIEVNIA* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00612 641 SUPERFAMILY L domain-like 51 215 - -
Rops5g00612 641 Gene3D Phosphorylase Kinase; domain 1 314 424 - -
Rops5g00612 641 Gene3D Transferase(Phosphotransferase) domain 1 425 640 - -
Rops5g00612 641 Pfam Protein kinase domain 352 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops5g00612 641 SUPERFAMILY Protein kinase-like (PK-like) 353 624 IPR011009 -
Rops5g00612 641 MobiDBLite consensus disorder prediction 235 254 - -
Rops5g00612 641 Gene3D Ribonuclease Inhibitor 49 234 IPR032675 -
Rops5g00612 641 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 32 629 IPR046959 -
Rops5g00612 641 MobiDBLite consensus disorder prediction 235 256 - -
Rops5g00612 641 ProSiteProfiles Protein kinase domain profile. 349 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00612 Rops-Chr5 10320125 10322344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00612 52 627 Receptor kinase-like Gene Family AT1G48480 35.783 1.26e-108 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops5g00612 Pkinase 5.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00612 - - gmx:102668068 945.651