Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00607 ATGCGTAAAGATTTCAGTCCACGCGTTTTGCTGCACCTCCTCCACCGCTTCCACAGCCACCAGATCCACCGCCATCCAAAGGATGAGAAGAAGAAGCTGAGGTTTTTGGTTATCAAGCTCCATGGCGTGACGGAGAAGAAAGAGCGAAGGAAGGAAGACAAAAGCAAATGCAGATTACCACAAGGAAGGAGAGGCTGGCCTTTGATTGGTGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGCAGAGGTATGGTAAGATATTTTCTTGCAGCCTATTTGGAAAATGGGCAGTGGTATCAGCAGATCCAAGCTTCAACCGTTTTATAATGCAAAATGAAGGAAAATTATTCATGTCAAGTTACCCAAAATCTTTCAGAGATTTGGTTGGTAAAAATGGTGTGATCACAGTGCAAGGAGAGCAACAAAGGAAACTACATGGCATTGCTTCCAATATGATGCGCCTAGAGAAGCTTAAGTTCCATTTCTTGAATGATATACAAAAGGTCATGTGTCAAACTTTGAGCAATTTTGACAACCACCAAGTCATTCATCTCCAGGATGTTTGTAGAAAGGTGGCTATAAATTTAATGGTTAATCAATTGTTGGGGGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCTCAGTTGTTTTCTGACTTTGTTGATGGTTGTCTATCCATTCCTATCAATTTCCCAGGCTTTGCATACCACACTGCCATGAAGGCAAGGGAGAAAATCATAAGCAAGATAAACAAGACCATAGAGGTACACAGACAAAATGGTGCTCCCATAGTAGGTAATGGTGTACTTGGAAGACTACTAGAGGAAGAGAGCTTGCCAGATGAGGCTGTTGCAGACTTCATCATCAATCTTCTCTTTGCTGGGAATGAAACAACCACCAAAACAATGCTTTTTGCAGTCTATTTCCTTACTCAATGTCCTACAGCCATGAAGCAACTTCTGGATGAACAGGATTCTCTAAGGAGTAATAGTGGAGAAGAATTGCTTACATGGCAGGATTATAAAGCAATGCCATTCACTCAATGCGTTATTGATGAAACACTTAGACTTGGGGGAATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACATTCAATACCAAGATTTTGTTATTCCCAAAGGATGCTTTGTGGTTCCATTTCTTTCGGCAGTTCATTTAGATGAGGAAGTGTACAATGGAGCTCTAAAATTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGAAAAGAGAAACTGGAGAACTAGTCCATTCTATGCACCTTTTGGAGGAGGTGCTAGATTCTGTCCAGGAGCAGAGCTGGCTCGCCTTCAAATTGCTCTTTTTCTTCATTACTTTGTTACTACCTATAGGTAA 1413 0.4119 MRKDFSPRVLLHLLHRFHSHQIHRHPKDEKKKLRFLVIKLHGVTEKKERRKEDKSKCRLPQGRRGWPLIGDSINWYNAVASSHPPQFVEEMVQRYGKIFSCSLFGKWAVVSADPSFNRFIMQNEGKLFMSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMCQTLSNFDNHQVIHLQDVCRKVAINLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINFPGFAYHTAMKAREKIISKINKTIEVHRQNGAPIVGNGVLGRLLEEESLPDEAVADFIINLLFAGNETTTKTMLFAVYFLTQCPTAMKQLLDEQDSLRSNSGEELLTWQDYKAMPFTQCVIDETLRLGGIAIWLMREAKEDIQYQDFVIPKGCFVVPFLSAVHLDEEVYNGALKFNPWRWMEPENEEKRNWRTSPFYAPFGGGARFCPGAELARLQIALFLHYFVTTYR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00607 470 CDD CYP90-like 92 470 - -
Rops5g00607 470 PANTHER CYTOCHROME P450 26 56 469 - -
Rops5g00607 470 Gene3D Cytochrome P450 48 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 SUPERFAMILY Cytochrome P450 55 469 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 Pfam Cytochrome P450 60 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Rops5g00607 470 PRINTS E-class P450 group IV signature 448 466 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS E-class P450 group IV signature 432 448 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS E-class P450 group IV signature 404 422 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS E-class P450 group IV signature 296 322 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS E-class P450 group IV signature 355 371 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS E-class P450 group IV signature 86 109 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops5g00607 470 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00607 Rops-Chr5 10257830 10273687 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00607 33 470 Cytochrome P450 AT1G73340 73.182 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00607 - - gmx:100806921 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00607 5 10257830 10273687 Rops5g00607 5 10257830 10273687 ECH