Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00598 ATGGGAAAAGAACTAGTTAGACAACAATCAACTTGGACTGGAAAACGTACTAGGTTGTGGTTTCATGAGGACGTTATTTGCTTTTTGGAGAAGAATAAGGAAAATGATAAAATTGAAGTCATGATGTTGGATATGCCCAGAGATAAAGAGGTTCAATGGAATGAAGAGGTCCTTGGAAAGATGAAAAACATCAAGATGTTTATAAAAAGGAAAGGTTGTGTTTTGGGAAGCCCCAAACATCTCCCGAATAGTTTGAGAGTGTTGGAATGGTGGGAATATCCTGCAACTTCTTTACCATCTAATGTTCATTCAAAGAATCTTGTCATACTCAACTTGTCACACAGTTTCTTTGAATGGGAGACACCACTAGAGGAGTCAAAGGTTTTGCGTCAGTTGAACTTTACAGGTTGTAAGAACATAAGACAGATACCTGACGTGTCTGGTTTTCCAAATTTGATGGAATTGTGTATTGATGATTGCACAAATTTGATTGAGATTCATGATTCTGTTGGATTTCTTGATAAGCTACAAACGCTCAGTGCTAAAGGATGTATCAAGCTTAATACTGGTCTACGGGGCATGAAGTTGACATCTCTAGAATATCTTTGCCTTCGGGGCTGCAACAGTCTTATTACGTTTCCAGAAATATTAGGACCAATGAATAAGCTCAAATCTGTAGACTTGGGATGGACTGCATTAAAAACTTTACCAGCATCAACATATGATCTTCAAGGCCTTGAAATGTTAAACATGACGGGATGCAAAACATTAAAAAGTAATGCGGCCATCAAATGCATTCCATTGAATGAGATCAAATGTGTAGAGTTGGGATGGATTGCATTAGAAACTTTACCAGCATGTCTTCAAGGCCTTGAAATGTTAAGCCTGATGGGATGTAGAACATTAGAAAGTAAGGAGGCCATCAAATGCATTCAAATATTGGATATGATAATGCAGCTTGGACAAATCAGAGGGCTTCCACCAAGCGAATTTAGTTTCTATGCACACACCTGCACCTCATTGAAAGTCGGTTGTTCAACTTTAAACACGTGGTTACAAAACGGGGCAATTACTTTCACTCTATCAAACTCCTGTATTCAACCAGGACAAAGCATCCCAGAATGGTTTGACCTTTTCTCTTGTATTGGAAACTCTACACGTTTCTGGTTTCCGAATTTGGCCGATGGAATTCTATTTTCAGAGAATGAGTGGAATTATGGGGAGGTTGTATTTGAGATGGTGAAACCATCAAATTTGGATTCAGGTTATTCAGGATCAATCAAATGGACCAGAGTAAACAGAACATTTACTAGAATGGAGGATGTTCGATTCACAAATCTTTATCCTCCCAAAAGTACACCTGATGACTCAAGCTATAGTAATGGTGATACATTCCTGAGTGAGGCACCTAATATACAACGAGACTGGGTTCCAATGCGTCCACCTGAAGAACAATGTTTGAATTATGAGTATAGCAATTCAGATTCATTGGAACTGGCATGGCCTATTGATGAAGCATTCTTGGATCATCAAGCAAATGTTCCCGGAGAATCATCTAAAGCCCCAGGTTGTGTGGAGTTACAAAATAATCAGGTCCAAAGTCTCACATCATCAAGTGGCCAAGTAAGACGAGAACTACACCTAGGAACTAGTTCCACTGTGTTGTCGACAACAGTTGATGCATCTCTAAGAAATCAAACTGAACTAACTCAAGATGATGATGTAGAAATGAAAGCATTTTATGCTTCTCTTGATGCTGAGACCTATGTGATTTCACATTCCCATGATCAATTAGCTACCACTGCTCCAAGTGAAGAGGCCAAGGAAGCATTCAAAATAGTACAAGACTTCATCTCCAATGATGCTTCAGTTTTGTTGCATCCTGAACAGTGCAGTGTCATGAAAACAAGCTTAGAATACCTTTCCAATTTGTCTGTAGATGATGGTATATCAACAGAAATGAGAACACTGATATCAGAAGCTTCAAGGGAGTTCACTCATTGGAGTAAGGACTACATTGAAGCAAGTGTGACAATTGAGTCCACAGCATCCGAGTTGCACAGAGGTGATGAATTAGAAGCAGGTCTGGAAGCTAACAAGCAGCAGTTCTCGGAAGATGTGGCCTTGGAAGATGAGCTGCTCCAAAAGTTAGCCATGTTGGAAGAAAGAAAGAAGGATCTTGAAGAGCAAATCAATGTCATTAAAGCTGACATCTCTGCTTCTGAAACAGAAAAGAACATAGCTCGTCAGAGAAAGAGAGACATCTTTCAAGAAGGAAAGATGCTCAAAGCTCAAAGAGATGAGTTGAGGAAAAACACACCTCGTTTACAACAAGAGCATGGTATGGCAAAGGAAAGACAAATAAGAATTCAAGCTGATTGGTCAAAACTCAGAGAAAAATTCAAATAG 2409 0.3927 MGKELVRQQSTWTGKRTRLWFHEDVICFLEKNKENDKIEVMMLDMPRDKEVQWNEEVLGKMKNIKMFIKRKGCVLGSPKHLPNSLRVLEWWEYPATSLPSNVHSKNLVILNLSHSFFEWETPLEESKVLRQLNFTGCKNIRQIPDVSGFPNLMELCIDDCTNLIEIHDSVGFLDKLQTLSAKGCIKLNTGLRGMKLTSLEYLCLRGCNSLITFPEILGPMNKLKSVDLGWTALKTLPASTYDLQGLEMLNMTGCKTLKSNAAIKCIPLNEIKCVELGWIALETLPACLQGLEMLSLMGCRTLESKEAIKCIQILDMIMQLGQIRGLPPSEFSFYAHTCTSLKVGCSTLNTWLQNGAITFTLSNSCIQPGQSIPEWFDLFSCIGNSTRFWFPNLADGILFSENEWNYGEVVFEMVKPSNLDSGYSGSIKWTRVNRTFTRMEDVRFTNLYPPKSTPDDSSYSNGDTFLSEAPNIQRDWVPMRPPEEQCLNYEYSNSDSLELAWPIDEAFLDHQANVPGESSKAPGCVELQNNQVQSLTSSSGQVRRELHLGTSSTVLSTTVDASLRNQTELTQDDDVEMKAFYASLDAETYVISHSHDQLATTAPSEEAKEAFKIVQDFISNDASVLLHPEQCSVMKTSLEYLSNLSVDDGISTEMRTLISEASREFTHWSKDYIEASVTIESTASELHRGDELEAGLEANKQQFSEDVALEDELLQKLAMLEERKKDLEEQINVIKADISASETEKNIARQRKRDIFQEGKMLKAQRDELRKNTPRLQQEHGMAKERQIRIQADWSKLREKFK* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00598 802 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 276 IPR044974 GO:0006952
Rops5g00598 802 SUPERFAMILY L domain-like 40 329 - -
Rops5g00598 802 MobiDBLite consensus disorder prediction 766 785 - -
Rops5g00598 802 Coils Coil 710 744 - -
Rops5g00598 802 Gene3D Ribonuclease Inhibitor 54 192 IPR032675 -
Rops5g00598 802 Gene3D Ribonuclease Inhibitor 193 382 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00598 Rops-Chr5 10143193 10147075 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00598 2 316 WRKY Transcription Factor Family AT4G12020 30.409 9.41e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00598 - - var:108344061 412.149